Lolium rigidum (rigid ryegrass): 124655243
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Entry
124655243 CDS
T09103
Name
(RefSeq) probable E3 ubiquitin-protein ligase XERICO
KO
K16285
RING/U-box domain-containing protein [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124655243
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124655243
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124655243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_16
zf-RING_UBOX
Prok-RING_4
zf-ANAPC11
zf-C3HC4_4
zf_RING_Vps8
RINGv
DUF7520
TackOD1
PHD
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
124655243
NCBI-ProteinID:
XP_047050127
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All DBs
Position
5:complement(37457601..37458438)
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AA seq
159 aa
AA seq
DB search
MGISSMPAPKESLLIYLLYHAVVSVAALAGLLRAALVFFGLPAPPPLLDDGEGADLLTPS
GPTLADLFRARFRPARFGRRRGPGAAAATTPDCRVCLVRFEAEAVVHRLPCGHVFHGACL
ETWIDYDHATCPLCRSRILPAATASPPPPPAPHGLTAWI
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgggcatctccagcatgccggcgcccaaggagagcctgctgatctacctgctctaccac
gccgtcgtctccgtcgccgcgctcgcgggcctcctccgcgcggccctcgtcttcttcggc
ctccccgcgccgcccccgctgctggacgacggcgagggcgccgacctgctcaccccctcg
ggccccaccctcgcggacctgttccgggcccgcttccgccccgcccgcttcggccggaga
cgcggccccggcgccgccgcggccacaacgcccgactgccgcgtgtgcctggtccgcttc
gaggcggaggccgtggtgcaccgcctcccctgcggccacgtcttccacggcgcctgcctc
gagacctggatcgactacgaccacgccacctgcccgctctgccgctcccgcatcctcccc
gccgccaccgcctctccgccgccgccgccggcaccccacggcctcaccgcctggatttag
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