KEGG   Lolium rigidum (rigid ryegrass): 124655329
Entry
124655329         CDS       T09103                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 9B
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03020  RNA polymerase
lrd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124655329
  09124 Replication and repair
   03420 Nucleotide excision repair
    124655329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lrd03021]
    124655329
   03400 DNA repair and recombination proteins [BR:lrd03400]
    124655329
Transcription machinery [BR:lrd03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124655329
DNA repair and recombination proteins [BR:lrd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124655329
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_ribbon_4
Other DBs
NCBI-GeneID: 124655329
NCBI-ProteinID: XP_047050199
LinkDB
Position
5:70899281..70900712
AA seq 114 aa
MSAMKFCRECNNILYPKEDRDQKALLFACRNCDHQEVADNNCVYRNIVHHSAGEFTQVLQ
DVAGDPTLPRTKEVRCAVCGHGEAVFFQATARGEEGMTLFFVCCNPSCGHRWRE
NT seq 345 nt   +upstreamnt  +downstreamnt
atgagtgccatgaagttttgccgtgaatgcaacaacatactgtatcccaaggaggacagg
gaccagaaggcgctcctcttcgcctgcaggaactgcgaccaccaggaggtcgcagacaac
aactgtgtctacaggaacattgtgcaccacagcgccggagagttcacgcaggtgctccag
gacgtcgccggtgacccgactctgccccgcaccaaggaggtccggtgcgccgtctgtggc
cacggcgaagctgtcttcttccaggccaccgcgaggggggaagaagggatgacgctgttc
ttcgtctgctgcaacccaagctgcggccatcgatggagagaatga

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