Lolium rigidum (rigid ryegrass): 124655461
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Entry
124655461 CDS
T09103
Name
(RefSeq) clathrin heavy chain 1-like
KO
K04646
clathrin heavy chain
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04142
Lysosome
lrd04144
Endocytosis
lrd05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124655461
04142 Lysosome
124655461
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
124655461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124655461
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124655461
Membrane trafficking [BR:
lrd04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
124655461
Exosome [BR:
lrd04147
]
Exosomal proteins
Proteins found in most exosomes
124655461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
124655461
NCBI-ProteinID:
XP_047050307
LinkDB
All DBs
Position
5:complement(136687433..136697223)
Genome browser
AA seq
1708 aa
AA seq
DB search
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESERYICVRETSPQNSVVIIDMAMPSQ
PLRRPITADSALMNPNTRILALKAQIAGTTQDHLQIFNIEAKTKVKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPVKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVPGNENPSTLICFASKASNAGTITS
KLHIIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQISQKYGLVYVITKLGLLFVYDL
ETASAVYRNRISPDPIFLTAESSTTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAYESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPLDYNTITDLFLQRNMIREATAFLLDVLKPNLEEHAFLQTKVLE
INLVTYPNVADAILANGMFTHYDRPRIAQLCEKAGLYLRALQHYAELPDIKRVIVNTHAI
EPQALVEFFGTLSKEWALECMKDLLLVNLRGNLQIVVQAAKEYAEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPEIHFKYIESAARTGQIKEVERVTRESNFYDAEKTKNFLMET
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDEELINVTNKNSLFKLQARY
VVERMDGDLWDKVLEPENEYRRQFIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADSSRVMDYVNRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDVTHFLDVIRAAEEANVYHDLVKYLLMVRQKAREPKVDGELIFAYAKTDRLSDI
EEFILMPNVANLQNVGDRLFDEELYEAAKIIYAFISNWAKLAVTLVRLKQFQSAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWEHMQFKDVCVKIANVEIYYKAVHFYLQEHPDLINDLLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRADVALELAWTNNMLDFAFPYLLQFIREY
TSKVDDLVKDRIESQKEEKAKESEEKELVAQQNMYAQLLPLALPAPPGMMGGPPPMGGMG
MPPMGGMGMPPMGPGPMPAYGMPPMGSY
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccaacgcccccatcgccatgcgcgaggccctcacgctcaccagcctgggg
atcgcgccgcagttcgtcaccttcacgcacgtcaccatggagtcggagaggtacatctgc
gtccgcgagacctccccgcagaacagcgtcgtcatcatcgacatggccatgcccagccag
cccctccgcaggcccatcaccgccgactcggcgctcatgaaccccaacaccaggatcctc
gcgctcaaagctcaaatagctggaaccacacaggatcacttgcaaatatttaatattgag
gctaagactaaagttaagtcacaccagatgcctgaacaggttgtgttttggaaatggatc
acaccaaagttgttgggtttggttacacagacatctgtttatcactggtcaattgaagga
gattctgagccagttaagatgtttgataggacagctaatttggccaataatcagattatc
aactatcgatgtgatccagcggagaagtggcttgtgcttattggaattgcacctggtgct
ccagagaggccgcagctggtgaagggaaatatgcaacttttttctgtggatcagcagcgt
agccaagcacttgaagcccatgctgcttcttttgcaacattcaaggttcctggcaacgag
aacccatccaccctcatctgttttgcttcgaaggcatctaatgctggaacaattacttcg
aagctacatattattgaactgggtgcccagccagggaaacctggcttttccaagaagcaa
gccgatctcttcttcccaccagatttccaggatgattttcctgtagcaatgcagatctct
caaaagtatggccttgtctatgtaatcacgaagcttgggcttttgtttgtgtacgacttg
gaaactgctagcgcagtttataggaatagaatcagcccagatcccatattcttgactgca
gagtcttctactactggtggattttatgctattaacagaagagggcaggttttgcatgcc
actgttaatgatgcaaccgttgtaccatttgtcagcggtcaattaaacaaccttgaacta
gccgtgaatcttgccaaaagagccaatctccctggggcagagaacttggttgtgcaacga
ttccaggaactgttcgcgcagacaaaatacaaggaagcagcagagctggctgcagaatct
cctcagggtcttctgaggactcctgagactgttgccaaattccagagtgttcctgttcaa
gctggtcaaacacctccactcttgcagtactttggcacactgcttactcgagggaaactg
aatgcttatgaatctctcgaattatctcgccttgttgtcaatcagaacaagaagaacctt
ttagaaaattggttggcagaagacaagttagagtgcagcgaagaacttggagatcttgtc
aagacggtagacaatgatcttgcgctgaaaatatacataaaggctagggcaacccctaaa
gtcgtcgccgcttttgctgagaggagggagtttgacaagatccttatatactcaaagcag
gtcggatacactcctgactacctcttcctccttcagaccatcttacgtacagatccacag
ggagctgtcaactttgctctcatgatgtcacaaatggagggcggttgtccgctagattat
aatacaataactgatctcttccttcagagaaatatgatacgtgaagcaacagcttttctg
ttggatgtactgaaaccaaatttggaagagcatgctttccttcaaaccaaggttttggag
atcaacttggtgacctacccaaatgttgctgatgccattcttgctaatggtatgttcact
cattacgaccgacctcgtattgctcagctgtgtgaaaaagctggcttgtacttgcgggcc
ctccagcactacgcagagttacctgatatcaagcgtgttatcgtgaatacacatgctatt
gagccacaggcacttgttgagttctttggaaccctttctaaagaatgggcattagaatgc
atgaaggaccttctactggtcaacttgagaggaaatcttcaaattgttgtgcaggctgcc
aaagaatatgctgagcagcttggagttgacgcctgcataaaactatttgaacaatttaaa
tcatatgaaggcctctacttcttcttaggatcctatttgagctcaagtgaggatcctgaa
attcatttcaaatacatagaatcagctgcaaggactggacagattaaagaagttgagcga
gttaccagagagtctaacttttatgatgctgagaagacgaagaacttcttgatggaaaca
aaattgcctgatgcccgcccactcataaatgtttgcgaccgctttggttttgttccagat
cttactcactatctctatacaaataatatgctccggtatatcgaaggctatgtacagaaa
gtgaaccctggaaatgctccattggtagtagggcagctacttgatgatgagtgcccagaa
gatttcatcaagggtttgatcttgtcggtccgttctctcctccctgttgagccactggtt
gatgaatgcgagaagaggaatcgactacggttacttacacaattcctggagcacttggtg
agcgagggtagtcaagatgtgcatgtccacaatgctcttggaaaaattatcattgatagc
aacaacaatcctgagcatttcctgactaccaacccgttctatgactcccgtgtggtgggt
aaatactgtgaaaagagggatcctacgcttgccgttgttgcttacagacgtggacagtgc
gatgaagaacttatcaatgttaccaacaaaaattcgttgttcaagctgcaagctaggtat
gtggttgaaagaatggatggcgatctgtgggataaagttctagagcctgaaaatgaatat
agaaggcaattcattgaccaggtggtgtctaccgcattgccagaaagcaagagtcctgaa
caagtttctgctgctgttaaggctttcatgacagctgacctccctcatgaactgatagaa
cttcttgaaaagattgtccttcagaactctgcgttcagtggaaactttaatcttcagaat
ctgctcatcttgacagccatcaaggcggactcatctagagtcatggactatgttaacaga
cttgataactttgatggtcccgctgtcggagaagtggctgttgaagcacaactctatgag
gaggcctttgccatattcaagaagttcaacttgaatgtgcaggctgtcaatgttctgttg
gataacatccgaagcattgaaagagctgaagagttcgctttccgtgttgaagaagatgct
gtttggagccaggttgccaaggcccagctgcgtgaaggtctagttagcgaagcaatcgaa
tcattcatccgtgcagatgacgtgacacacttccttgatgtcattcgtgctgctgaggaa
gcaaatgtttaccatgatttagttaagtacttgctgatggtaaggcaaaaggcaagggag
cccaaagtcgatggtgaactcatctttgcatatgctaagactgataggctcagtgacatt
gaagagttcattctgatgccaaatgtcgcgaatctccaaaatgttggtgaccgtttgttt
gacgaagagctttacgaagccgcaaagatcatctatgccttcatctcaaactgggccaag
ctggctgtcaccctggtcaggctgaagcagttccaaagtgctgtagatgctgcccgtaaa
gctaacagtgctaaaacatggaaggaagtctgctttgcttgtgttgatgctgaggagttc
cgtctagcacaaatctgtggcctcaatattatcgtccaggttgatgacttggaggaagtc
agcgaatactaccagaacagagggtgcttcaatgagcttatttcccttatggagagtggt
cttggacttgaacgggcacatatgggcatctttacagaactgggagttctctatgctaga
taccgccctgaaaagctcatggaacacatcaaactgttctccacccgtctcaacattcct
aagcttatccgtgcttgtgatgaacagcagcactggaaagagcttacatacctatacatc
caatatgatgaatttgacaatgctgccacaactatcatgaaccactcaccagatgcgtgg
gaacatatgcaatttaaggatgtttgtgttaagattgcaaatgttgagatatattacaag
gcagtgcacttctatttgcaagaacaccctgatctcatcaatgatcttctcaatgtgctt
gcgcttcgtttggatcatacaagagttgtagacataatgcgcaaggctggtcagttgcat
cttgtgaaaccgtacatggttgcagttcagagtaacaatgtctctgccgtcaatgaggct
ttgaatgagctttatgttgaagaggaggactacgagaggctccgtgaatctgtggacatg
catgataactttgatcagattggtcttgcccagaagcttgagaagcatgaattgcttgag
atgaggaggatagctgcctacatttacaagaaggctggcagatggaagcaatcaattgca
ttgtcgaagaaagataacatgtacaaggattgcatggagacatgctcacagtctggtgat
cgtgagctctcggaggacttgcttgtctattttatcgagcagggaaagaaagaatgtttt
gcttcctgcctcttcatttgctacgacttgattcgtgcggatgttgctcttgagcttgca
tggacgaataacatgcttgacttcgctttcccctatctgttacagttcatccgtgagtac
acgagcaaggtagatgatttagtgaaggacaggattgaatcacagaaggaagaaaaggcc
aaggagagcgaagagaaggaactagttgctcagcagaatatgtacgctcaattgcttcct
ctcgccttgcctgctccgcccggtatgatgggtggtccacctccaatgggcggtatgggc
atgcctccgatgggtggaatgggtatgccgcctatgggtcctggtccgatgccagcatat
gggatgcctccaatgggaagctactga
DBGET
integrated database retrieval system