Lolium rigidum (rigid ryegrass): 124655492
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Entry
124655492 CDS
T09103
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124655492
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124655492
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124655492
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
124655492
NCBI-ProteinID:
XP_047050329
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Position
5:246420792..246426003
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AA seq
624 aa
AA seq
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MVKIVTYNVNGLRPRMAQHGSLRRLLDSLDADIICFQETKLSRQDLSGDVIMAEGYEAFI
SCNRTSRGRGAYSGVATFCRVTSAFSSQEVALPVAAEEGFAGLQGSAKDSETIGDFVLQM
PVEEEGLGEITREELLRLDNEGRCIITDHGHFVLFNLYGPAIGEDDEERVRFKLLFYKIL
QKRWEYLLALGKRVFIVGDLNIAPGSIDRCDAPPGFEKQMFREWLRSMLRENDGPFFDAF
RSKHPERTGAYTCFNQKVGAEEYNYGSRIDHILISGSCFHNCNSAENHSIFHCHVDDCEI
MNHFKRSGDTENISKWKGGRSSKLEGSDHIPVYIILNGIPELPVHNTPSSAARYLPEIRG
RQQSIVSFLSKGKISEVEDGPGLNMSQDRANENCCTDDLESKSMSKEESSTGIAEFSKSG
DLPSSTSKRRNLDHWINEGPSGNSQNSSATLLAPHGMKATFSSIKSMSNKKNKHNLSSQP
TIKSFFRRPETRTEDANINSLVSSVDTVPGMGELCYPKDDSLPENIQCTAAAEVDQDSSI
SCSLSTDNCNVATLEWQRIQQRMKMTLPVCKGHREPCIPRSVKKGSNIGRQFYVCGRAQG
PSSNPEANCNHFQWASVKSKGKRQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatagtgacgtacaacgtgaacgggctgcggccgcggatggcgcagcacggc
tcgctccgccgcctcctggactccctcgacgccgacatcatctgcttccaggagacgaaa
ctgtcgaggcaggacttgtctggggatgtcataatggccgagggatacgaggcattcatt
tcgtgcaatcgtacctcgagagggcgtggagcatactccggtgttgcgacattttgccgg
gtaacatcagcattctccagtcaggaagttgcgctgccagtagcagctgaagaaggcttt
gctggattgcagggctctgcaaaagacagtgaaactattggggattttgttcttcaaatg
cctgtggaagaggaaggtcttggtgaaataacaagagaggagctactcaggctggacaat
gaggggcgatgtataatcactgatcatggacattttgttctttttaatttatatggccca
gccattggcgaagatgatgaagaacgagttcgttttaagctactattttacaagatactg
cagaagcgatgggaatacctattggctctagggaagagagttttcatcgttggagatctg
aatattgctcctggttctatagataggtgtgacgcccctcctggattcgagaagcaaatg
ttccgggaatggctgaggtccatgctaagagagaatgatggtcccttttttgatgctttc
agatcaaaacaccctgaaagaactggagcttatacttgttttaatcaaaaagttggagct
gaagaatacaattatggttctagaatagatcacattctcatttctggttcctgtttccat
aattgcaattctgcagagaaccatagcattttccactgccatgtggatgattgcgagata
atgaatcatttcaaaagaagtggggatacggaaaatatctcaaagtggaaaggagggaga
agtagtaaactagaaggatccgatcatattccagtgtatattatattgaatggaatacct
gaacttccagtccataataccccatcatcagctgcaaggtatctgccagaaatccgtgga
cggcaacagagtatagtatcattcctcagtaaagggaaaatttctgaagttgaagatggc
ccaggtttaaatatgtcccaggatcgagcaaatgaaaactgctgtactgatgacctggag
agcaaaagtatgtccaaggaagaatcgtcaactggtattgccgagttttctaaaagtggt
gaccttcctagttctacgtctaagcggaggaatctcgatcattggataaatgaaggtcca
agtggcaactcccaaaatagtagtgcaacattactggcaccacatggtatgaaagctact
ttttctagcatcaagtctatgtcaaacaagaagaacaaacataacttatcctcacagcca
acaatcaaatcattttttcgaagaccagagacaaggacagaggatgccaatatcaatagc
ttagttagttcagtagatacagtaccgggtatgggtgaattatgttatccaaaggatgat
agtctgccggagaacattcagtgtacagctgcagctgaagtagatcaggacagctctata
tcatgttcactttcaactgataactgtaatgttgcaacattggagtggcaaagaatacaa
cagagaatgaagatgaccctaccagtctgcaaaggacatcgtgaaccttgcattccaagg
tctgtgaagaagggctccaatattggtcgccaattctatgtctgtggccgtgctcaggga
ccttcatcaaatccagaagctaactgcaatcattttcagtgggcctctgtaaaatctaaa
ggaaagcggcaatga
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