Lolium rigidum (rigid ryegrass): 124655551
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Entry
124655551 CDS
T09103
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3-II-like
KO
K13148
integrator complex subunit 11 [EC:3.1.27.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124655551
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Integrator complex
124655551
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GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
124655551
NCBI-ProteinID:
XP_047050387
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Position
5:191488262..191496733
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AA seq
553 aa
AA seq
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MAIECLVLGAGQEVGKSCVVVTIGGKRIMFDCGMHMGHHDCQRYPDFARILSAAPGATDF
TSAISCVVITHFHLDHIGALPYFTEVCGYNGPVYMTYPTKALAPLMLEDYRKVMVDHRGE
EEQYSYEDIQRCMKKVIPVDLKQTIQVDRDLVIRAYYAGHVLGAAMIYAKVGDAAMVYTG
DYNMTPDRHLGAAQIDRLKLDLLITESTYAKTVRDSKHAREREFLKAVHKCVSGGGKVLI
PAFALGRAQELCILLDDYWERMNLKIPIYFSAGLTIQANMYYKMLIGWTSQKIKDSCTVH
NPFDFKHVCHFERSFINDPGPCVLFATPGMISGGFSLEVFKRWAPSEKNLVTLPGYCVAG
TIGHKLMSGKPTKIDLDKDTHVDVRCQIHQLSFSPHTDSKGIMDLTEFLSPSHVILVHGE
KPQMAFLKDRIESELGMPCYYPANNETVSIPTTHYLKINATEKFITSCTAAQARDGLQKA
NLLCGNHLSGVDGDAKADEGILLMEKSRAPKILCEDELLQLLGTERHPVQFEPLLSSRIE
EAQTTVVDDVANE
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctatcgagtgcctcgtgctaggggcggggcaggaggtggggaagagctgcgtggtg
gtgaccatcggcgggaagcgtatcatgttcgactgcggcatgcacatgggccaccatgac
tgccagcggtaccccgacttcgcgcgcatcctttccgccgccccaggcgccaccgacttc
acctctgccatctcttgtgtcgtcatcacacacttccatttggatcatattggggcgctg
ccgtatttcaccgaggtctgcgggtacaatggtccagtctacatgacgtacccaactaag
gctttagctccattgatgctggaagattataggaaagtaatggtagatcacagaggggag
gaagaacaatatagttatgaagatattcagcgttgtatgaagaaagtcatacctgttgac
ttgaagcaaaccattcaagtggatagggaccttgtgatccgtgcctattatgctggacat
gttctaggggccgcaatgatttatgcaaaagttggagatgctgctatggtctacacgggg
gattacaacatgacaccagacagacatcttggagcagcacaaatcgatcgtctgaagttg
gacctcttaataacagagtctacatacgctaaaactgtacgtgactcaaagcatgcccga
gagagggagttcttaaaagcggtccataaatgtgtttctggaggaggtaaagttctgatt
ccggcatttgctttgggaagagctcaggagctatgcatattactggatgactattgggaa
aggatgaacttgaagattcctatctatttctcagctggtttaaccattcaagctaacatg
tactataagatgcttattggatggactagccaaaagatcaaggacagctgcacagttcac
aacccgtttgacttcaagcatgtttgccactttgagcgttcattcatcaacgatcctgga
ccctgtgtactttttgcaacacctggtatgattagtggtggattttcacttgaggtgttt
aagagatgggctccatcagaaaaaaatctggttacacttccaggatattgtgttgccgga
accattggccataaattgatgtctggaaaacctaccaagattgatttggacaaggatacc
catgttgatgtcagatgtcagatccatcagttgtcattcagtcctcacacggactccaaa
gggatcatggatcttacagagtttctttcacccagccatgtgattctcgttcatggtgaa
aagcctcagatggccttcttgaaggataggattgaatccgaattggggatgccatgctat
tacccagctaacaacgaaactgtctccattccgacaactcactatctgaaaataaacgcc
acggagaagtttatcacgagctgcaccgctgctcaggctagagatggtctgcagaaggca
aacctgctttgtggcaaccatctgtcaggagtcgatggtgatgcgaaggcagatgagggc
attcttctaatggagaagtctagggcaccgaaaattttgtgcgaggatgagctccttcag
ttgctgggcacggagcgccatcctgtccaatttgaaccgctgcttagctcgaggattgaa
gaggcacaaaccaccgttgtagatgatgtagccaatgagtga
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