Lolium rigidum (rigid ryegrass): 124655901
Help
Entry
124655901 CDS
T09103
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124655901
04121 Ubiquitin system [BR:
lrd04121
]
124655901
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
124655901
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
124655901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
NCBP3
Motif
Other DBs
NCBI-GeneID:
124655901
NCBI-ProteinID:
XP_047050684
LinkDB
All DBs
Position
5:complement(43786672..43791110)
Genome browser
AA seq
1211 aa
AA seq
DB search
MDDLLDPLRDTKALAEAVKEAEEERVAHAVFDAEMEWRPQQPQRTTTPTSHGLLMTLMLS
HADRPSRATVSVPHRRLAVVSKALPPPQIRSSTPHNPSNHHRLLLATPPPPHLPASAPNS
PTEDTPHLGFPSRRRMQPSTDPRHGNGPATAASPALWRPRSAAARNPYAADPRPYAAHDT
TAPILPNPPSDARPHSRRHRPNRRPAPPQDRPPANNINNRRPPPQERAPLAPAPAPAPVI
TGVPQLVQEIQDKLSRGAVECMICYDAVRRAAPVWSCASCFSIFHLPCIRRWARAPASSV
PSVSSPAAWRCPGCQSVHAVLARDIAYTCFCGRRRDPPNDLFLTPHSCGEPCSKPLGAAA
AKGHDNDASTRCPHVCVLQCHPGPCPPCKAFAPERPCPCGKQSIVRRCADRTTPVTCGQP
CERLLPCRRHRCHNPCHTGPCGECQVTFPARCFCGKTTNTIPCGETASLSDTAGGAFSCG
EACGHGLACGNHACRDACHPGPCGECRLLPGKVTACHCGKTGLRETRASCLDPVPTCENV
CDRKLPCGAHRCKVTCHEGRCPPCSARVEQRCRCGSSGQMVECYKASAEEFRCSKPCGSK
KNCGRHRCSECCCPLSKPFARHGGGGVDPHFCQIPCGKKLRCRQHGCQHLCHSGHCDPCR
ETIFSDLTCACGRTSVPPPQPCGTPTPSCPHPCTVPQPCGHPASHQCHFGDCPPCVVPVT
RECSGGHVMLRNIPCGSKDIRCNQPCGKNRQCGLHACARTCHPAPCDPPPASGDASSSSG
SKVSCRQSCGVPRRECKHTCNSPCHPSSPCPDVRCQVRVTITCSCGRITSNVPCSAGGSY
YNGDSMLDISIIEQLPRPLQPVDSNGKRVPLGQRKLCCDEECAKVERKRVLAEAFDITQP
NLDALHFGENSNASDLVSDLYRREPKWVLAIEERCKFLVLGKTRGNSSSNIKVHVFCHMT
KDKRDAIRLIADRWKLSVQAVGWEPRLFVTIHVTPKSKVPARVLGSKAGVPVSASHPYFD
PMVDMDPRLVVAMLDLPREADVSSLVLRFGGECELVWLNDKNALAVFGDPARAATALRRL
DYGSAYQGASMFCPSSITQDSASGNVWVGAQREGGSVAKTSANPWKTAGASDSDPSGGWT
VLGHSPGTNVLGQAPGSAWRRGDAAGQVMDTNRWNALESATTSSGPIAGAGQALEKLQPD
FEVEDWEESCE
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atggacgatctccttgacccgcttagggacaccaaggccttggctgaagcggtgaaggaa
gcagaggaggagcgggtggcccacgcggtgttcgacgccgagatggagtggcggccgcag
cagccgcagaggacgacaactccaacatctcatggtcttctgatgaccctgatgctctct
cacgcggaccgacccagccgggcaaccgtctccgtcccgcaccgccgacttgccgttgtc
tccaaggctctcccgcctcctcaaatacgctcttccactccgcacaatccatcaaatcac
caccgcctcctgctcgccacgccgcctccaccccacctccccgcctccgcccccaactcc
ccaacggaggacacaccacacctgggcttcccgtcccgccgccgcatgcaaccctccacc
gatccacgccacggcaacggcccagccacggccgcctcccctgccttatggcggccccga
tccgctgctgcgcgtaacccctacgccgccgacccccgtccctacgccgcccatgacacc
accgccccaatcctacccaacccgccctccgacgcccgtccgcacagtcgccgccaccgc
cccaaccgccgccccgccccgccgcaggatcgacccccagccaacaacatcaacaaccgc
cgtcccccgccgcaggagagggctccgctcgcgccagcgccagcgcccgcccctgtcatc
acaggggtgccgcagctggtgcaggagatccaggacaagctgtcccgtggcgcagtcgag
tgcatgatctgctacgacgcggtgcgcagggcggcgcccgtctggtcctgcgccagctgc
ttctccatcttccacctcccctgcatccgccggtgggcgcgcgcgccggcctcctccgtc
ccctccgtctcctcccccgccgcctggcgctgcccggggtgccagtccgtgcacgccgtc
ctcgcgcgcgacatcgcatacacctgcttctgcggccggcgccgcgacccgcccaacgac
ctcttcctcaccccgcactcctgcggcgagccctgctccaagcccctaggcgccgccgcc
gccaagggccacgacaacgatgcttcaaccaggtgcccccacgtctgcgtgctccagtgc
cacccgggcccatgcccgccctgcaaggcgttcgcgcccgagcgcccctgcccctgcggc
aagcagtcgatcgtgcggcgctgcgcggaccgcaccacgcccgtcacctgcggccagccc
tgcgaacgcctcctcccatgccggcgccaccgttgccacaacccctgccacacggggccg
tgcggggagtgccaggtcaccttccccgcgcgctgcttctgcggcaagacaacaaacacc
atcccgtgcggcgagacggcgagcctttcggacaccgccggcggcgcgttctcctgcggc
gaggcttgcgggcacggcctggcgtgcgggaaccacgcctgccgggacgcgtgccacccg
gggccgtgcggggagtgccggctcctgccggggaaggtcaccgcgtgccactgcggcaag
acggggctgcgggagacgcgggccagctgcctggacccggtccccacctgcgagaacgtc
tgcgacaggaagctgccgtgcggggcgcataggtgcaaggtcacgtgccacgaggggcgg
tgcccgccgtgctcggcgcgggtcgagcagaggtgccgctgcggctcgtcggggcagatg
gtggagtgctacaaggcctcggcagaagagttccgctgcagcaagccctgcggcagcaag
aagaactgcgggaggcaccggtgcagcgagtgctgctgcccgctgtccaagccgttcgct
cggcatggaggcggcggcgtggaccctcatttctgccagataccgtgcggcaagaagctc
cggtgcaggcagcacggctgccagcacctctgccacagcgggcactgcgatccctgccgc
gagaccatattcagcgatctcacctgtgcctgtggcaggacatccgttccgccgccgcag
ccgtgcggcacgccgactccgtcgtgcccgcacccgtgcactgtccctcagccttgcggg
catccagcttcgcatcaatgccatttcggagactgcccgccttgcgttgtgccggtgacg
agagaatgcagcggggggcatgtgatgctgaggaacatcccttgcggttcaaaggatatc
agatgcaaccagccatgtgggaagaaccggcagtgtggactgcacgcttgcgctaggact
tgccaccctgccccttgcgatccgccgcccgcaagtggagatgctagttcaagctccggg
agcaaggtttcatgtcggcagtcatgtggtgtcccgaggagggaatgcaagcacacctgc
aattccccatgccacccatcatcaccctgcccagatgtgagatgccaagtccgtgtgacc
attacctgctcttgtggccgtatcacttcaaatgtgccctgcagcgccggtggatcatac
tacaatggtgatagtatgctcgacatctccatcatagagcagctgccaaggcctctccaa
ccagtggattcaaatgggaagagggtacctcttgggcagaggaaactttgttgtgatgag
gagtgtgccaaagtggagaggaaaagagtccttgctgaagcttttgacattacgcagccc
aatctggacgcactgcatttcggtgagaactcaaatgcctcggatttggtttctgatctt
taccggcgcgagccaaagtgggtgctggccatagaggagaggtgcaaatttcttgtgctt
gggaagacgagaggaaattcttcaagcaacatcaaggtccatgtcttctgtcacatgacc
aaggataagagggatgctatcaggctcattgcagataggtggaagctgtctgttcaagcg
gttggttgggagcccaggctgtttgttaccatccatgtcacgcccaagtcgaaggtgcct
gctcgtgttctgggctccaaggctggcgtccctgtttcggcttcgcatccttactttgat
cccatggtggacatggacccgaggctcgttgtggcaatgctggacctgccaagggaggct
gatgttagctctctagtcttgaggtttggtggtgagtgtgagttggtttggctcaacgac
aagaatgccctggcagtcttcggtgatccagctagagccgccacagcgctcaggcggctg
gactatgggtctgcttaccagggtgcttcaatgttttgcccaagcagcatcactcaggat
tcagcatcaggcaatgtgtgggttggagcacagagagagggaggatcggttgcaaagacc
agtgccaatccatggaagactgctggtgcctcggattctgacccatctggaggctggaca
gtacttggtcattctccagggacaaatgtgcttggtcaagctccagggtcagcgtggaga
cgtggtgatgctgctggccaggtcatggatacaaacagatggaatgctctggagtctgct
accacaagctctgggccaatcgccggcgctgggcaagcactggagaagctgcagccagac
tttgaagtggaagactgggaagaatcatgcgagtga
DBGET
integrated database retrieval system
