Lolium rigidum (rigid ryegrass): 124656002
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Entry
124656002 CDS
T09103
Name
(RefSeq) protein ELC-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03250
Viral life cycle - HIV-1
lrd03272
Virion - Hepatitis viruses
lrd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124656002
03272 Virion - Hepatitis viruses
124656002
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124656002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124656002
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124656002
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
124656002
Exosome [BR:
lrd04147
]
Exosomal proteins
Proteins found in most exosomes
124656002
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
hemP
AKAP7_NLS
Motif
Other DBs
NCBI-GeneID:
124656002
NCBI-ProteinID:
XP_047050774
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Position
5:58956905..58959936
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AA seq
386 aa
AA seq
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MYAQQFLSTALSQRGPSALPYAEDVKWLIRNHLVALAGAFPSLHPRAALFTHNDGRAAHL
LQADGTIPITHAGAVYHLPAVLWLPDPYPRAPPLVFLSPTRDMLIKPHHPLVDRSGLVAG
APYLRSWVFPSSNLLDLARSLSHLFSLDPPLFSRSTPPNPLPASSSSMHHAPSPRPPSEY
ASRPYRFPASPQLAARPPSTEDPAEVFRRNAIAKLVDTAYADAAALGAARAAEVVALSAV
QAELRGRAESVDSGVRRITEEMEALERRLQDVTMATHVIEAWVAENRKGAADDVDSEAEG
AIQPADVLSRQMLDCSAADRALEDAIYALDRGVQEGSVPFDGYLRSVRALAREQFFQRVL
YTKVTREQQQAQVARMAARAPPQYAS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgcaacagttcctgagcacggcgctgtcccagcggggcccctcggcgctcccc
tacgcggaggacgtcaagtggctgatccgcaaccacctggtcgccctcgccggcgccttc
ccctccctccaccccagggcggccctcttcacccacaacgacggccgcgccgcgcacctg
ctccaggccgacggcaccatccccatcacccacgccggcgccgtctaccacctccccgcc
gtcctctggctccccgacccctacccgcgcgccccgcccctcgtcttcctctccccgacc
cgcgacatgctcatcaagccccaccacccgctcgtcgatcgctccggcctcgtcgccggc
gcgccgtacctccgctcctgggtcttcccctcctccaacctcctcgacctcgccaggtcc
ctctcccacctcttcagcctcgacccgcctctcttcagcagatccactcctcccaatcct
cttcctgcctcctcctcctcgatgcaccacgccccctctcctcgccccccttcagagtac
gcatcccgcccatacaggttcccggcctcgccccagctcgccgctcgcccaccgtccacc
gaggaccccgccgaggtcttcaggcgcaacgccatcgccaagcttgtcgacacggcctac
gctgacgctgccgccctgggtgctgcgcgtgcggccgaggttgtcgccctctccgccgtg
caggccgagctgcgtggccgggcggaatccgtcgacagcggggtgcgcaggatcaccgag
gagatggaggcgctcgagcgccgtcttcaggacgtgacgatggccacccatgtcatcgag
gcctgggtcgctgagaaccgcaagggggccgctgacgacgtagactccgaagcggagggg
gcaatccagcctgcggacgtgctgtccaggcagatgcttgactgtagtgcagctgatcgg
gcgctcgaggacgccatttatgcactcgacaggggcgtccaggaagggtccgtgccattc
gacggctacctcaggagcgtgcgcgctctggcgcgggagcagttcttccagcgcgtcctc
tacaccaaggtcactagggagcagcagcaggcgcaggtcgctaggatggccgcacgggct
ccgccacagtatgcgtcctag
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