Lolium rigidum (rigid ryegrass): 124656193
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Entry
124656193 CDS
T09103
Name
(RefSeq) small RNA degrading nuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124656193
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124656193
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
RNases
124656193
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Ortholog
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GFIT
Motif
Pfam:
RNase_T
DUF8085
Motif
Other DBs
NCBI-GeneID:
124656193
NCBI-ProteinID:
XP_047050938
LinkDB
All DBs
Position
5:complement(96866542..96873662)
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AA seq
554 aa
AA seq
DB search
MSTPSGSGEADRAAPTASTYYDVYGPDAKPDVVFKEGTSDSTLNLQDVQGLVTWVIGEGI
LPSWVFIKNKPLIPKVILLYVPGLDAALYMSQCRLLSSLKELCGNPKPVLASSCIPDERH
TIDALLTCRVKRKRNAQASNHSHESAGGKISSLDDLKDVPFPVKYYTLSAKDLEDNGYPS
SLSGFVPTVPAPSGSCPHEILALDCEMCVTAAGFELTRVTLVDIKGEVVLDKLVKPANPI
TDYNTRFSGITAEMLSDVTTTLQEIQEEFIGLVYKETILVGHSLENDLMALRISHDLVID
TAVLYKYNRGPRCKIALRVLANKYLSREIQNTGSGHDSAEDARAALDLALLKIKYGPDFG
SLPSLSRRKLASVLHESGKKCSLIDDVGVLDRYSDASCNSIAVFSDDDALSRSMKEVKND
NISFVWTQFSGLISYLLKRAQDPEKLKSCVAEAIALKTCDRKTARKRAKDQTCPELKEIL
SELDKKIRKLYDTLPENAMFIICTGHGDTPLVQRLKKMLNHGEETSESRKNIVEALEDLQ
AQAEVALCFCCVKH
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgccctccggctccggcgaggcggacagagcagctcccaccgcctccacttac
tacgacgtgtacggccccgacgccaaacctgatgttgtttttaaggagggcacttcagat
tctacattaaatttgcaggatgtccaggggttagtcacctgggttattggtgaaggcata
ttgccttcttgggtgttcattaaaaacaagcctcttatcccaaaagttatccttttgtat
gtccctggcctcgatgcagctttatatatgtcacagtgtcgcctcctttcttctttgaaa
gaattgtgtggcaatccaaaacctgttctagcttcaagttgtataccagatgaaaggcat
accattgatgcactcctaacatgcagagtaaagcgaaagcggaatgcacaagcatcaaac
cattcacatgaatctgctggaggtaagatatcaagtctggatgacctaaaagatgtccca
tttcctgtcaaatattacacactttctgcgaaagacttagaagataatggctacccatcc
agcttgtcaggttttgtccctacagttccagctccttcaggctcttgtccacacgaaatt
ctagcacttgattgtgagatgtgtgtgacggctgctggatttgaacttacaagagtgaca
ttagtcgatattaaaggagaggtggtactggataaactagttaagcctgccaatccaatc
actgattacaatacaaggttcagtggaatcactgctgagatgctatccgatgtgaccaca
accctccaggagattcaggaagagtttattggacttgtgtacaaagaaaccattcttgtt
gggcattctttggagaatgaccttatggcattacggatatctcatgatttggtcattgat
actgctgttttgtacaaatataatcgtggccctcgctgtaaaattgctttacgtgttctg
gcaaacaaatatcttagccgggagatccagaacacagggtctgggcatgacagtgcagaa
gacgcaagagctgctctggatcttgcccttttgaaaatcaaatatggtcctgattttggc
tctctgccatcgttatcgaggcgaaagttggcttctgttctgcatgaaagtgggaaaaaa
tgttccctcattgatgacgtgggcgttcttgatcgctattcagatgcttcttgcaattca
attgcagttttctcagatgatgatgccctctctagatcaatgaaagaggtaaagaatgac
aatatcagctttgtctggactcagttttctggattgatctcttatttacttaaaagagct
caagatcctgagaaattgaaatcctgtgttgcagaggctatagcattgaaaacatgcgac
agaaaaactgcacggaaaagagcaaaggatcaaacttgccctgagttaaaggaaattttg
agtgaattggacaagaaaattagaaaattatatgatacactgcctgaaaatgctatgttt
attatatgcactggtcatggggatacacctttggtacaaagattaaagaaaatgcttaac
catggagaagaaacaagtgaaagccggaaaaatattgttgaagcactggaagatttacaa
gctcaagcagaagttgcgctatgcttctgttgtgtcaagcattag
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