Lolium rigidum (rigid ryegrass): 124656242
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Entry
124656242 CDS
T09103
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124656242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124656242
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
124656242
Prokaryotic type
Archaeal type
TFB
124656242
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
CCD48
Ribosomal_S27e
Auto_anti-p27
Motif
Other DBs
NCBI-GeneID:
124656242
NCBI-ProteinID:
XP_047050979
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All DBs
Position
5:108583125..108584790
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AA seq
309 aa
AA seq
DB search
MESSHCKDCNVSTVIVLDHATGDTICSECGLVLDSHYVDEKPDWRTSTPFASNVDSYDPI
SVAESAINLKPKHNSTTAVRLEQRTFDHHQSLHGNILKSVDFSSHQPDTAFHYIADMADR
LGIVDSIKLEAKNLYMKANDLKLFNIRKKHSVCAACLYIACRQANKARTIKEICTVTNGV
TRKEVSRAKDLLVQHIEEKKGEFMEINSVRPRDLVRRFCSTLGMSNQAIQAAEEAANRVE
RLDIRRNAISIAGTIIYLISESSMEPRDKVSIKDICLVAGLTEVTIRYCHRELCGYASWL
LETYLTAKK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaatcatcacactgcaaagattgcaatgttagcacagtgatagtattagaccatgca
actggagacaccatatgctcagagtgcggccttgtactagatagccattacgtcgatgag
aaacctgattggcgcacttctaccccctttgcatcgaatgttgatagttatgaccctata
tctgttgcagagtctgctatcaatcttaaaccgaaacataattctaccactgctgtgaga
ctagagcaaagaacatttgatcaccaccagtctcttcacggcaatatactgaagagtgtt
gatttttcttctcatcaacctgacactgcgtttcactacatagctgatatggctgatagg
ttgggcattgttgatagcataaagcttgaagcaaaaaacctgtacatgaaagcaaacgat
ctcaagctgtttaatataaggaagaaacattcagtctgtgctgcttgcctgtacatagca
tgcaggcaagctaataaggctcgaactataaaagagatttgcaccgtcacaaatggagtt
acaaggaaagaggtttctcgagccaaagatttactagtacaacatattgaagagaaaaag
ggtgaattcatggagatcaatagtgttcgtccaagagaccttgtgcgtcgtttttgttca
acacttggcatgtcaaatcaagcaattcaagctgcggaagaagcagcaaatcgagtggag
agactggatataaggaggaatgctatatcaatagctggaactataatatatttaatatca
gagtcttctatggaaccacgcgacaaagtttcaattaaagatatatgcttagtagcagga
ttaacagaagttaccattagatattgtcatagagaactttgtggttatgcttcatggctc
ttggaaacctacttaactgcgaagaaataa
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