Lolium rigidum (rigid ryegrass): 124656438
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Entry
124656438 CDS
T09103
Name
(RefSeq) probable alpha-mannosidase At5g13980
KO
K01191
alpha-mannosidase [EC:
3.2.1.24
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
124656438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124656438
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.24 alpha-mannosidase
124656438
Membrane trafficking [BR:
lrd04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Selective cargos
124656438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_38N
Glyco_hydro_38C
Alpha-mann_mid
Laman-like_dom
Glyco_hydro38C2
Motif
Other DBs
NCBI-GeneID:
124656438
NCBI-ProteinID:
XP_047051140
LinkDB
All DBs
Position
5:133160184..133171293
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AA seq
1013 aa
AA seq
DB search
MYPFRRLALLLAAVVLLGPGGAAHGVYIPYNTSVGVVKGKLNVHVVPHTHDDVGWLKTVD
QYYVGSNNSIQAACVQNVLDSLVPALLKDKNRKFIYVEQAFFQRWWRQQSNSTKDTVKGL
VSSGRLEFINGGMCMHDEATVHYVDMIDQTTLGHRFIKEEFGQIPRIGWQIDPFGHSAVQ
AYLLGAQVGFDALYFSRIDYQDREVRKGTKKLEVVWRSSKTFGSSADIFSGIFPINYEPP
PGEFYFEVDDESPLVQDDPQLFDYNVERRVNDFVAAALAQANITRTNHIMFTMGTDFKYQ
YAESWFRQMDKLIHYVNKDGRVNALYSTPSIYTDAKFAANVAWPLKTDDFFPYADKPNSY
WTGYFTSRPALKRYVRLMSGYYLAARQLEFFKGRSNSGVTTDSLADALALAQHHDAVTGT
EKQHVANDYAKRLSIGYQKAEELVSSSLACLSESGSKSLCSSKTKNFGQCPLLNITYCPP
SEMNFSQGRSLVVLVYNSLGWKREDVLRIPVMSDSVVVHDSEGRVIESQLLPIANSSLNI
RDKYTKAYLGTLPAAKPKFWLAFPASVPPLGFNTYFVSSGKRSESVSSTSTLYFQGNKSS
NFQVGQGHLKLQYNAAGALSVYSDSKTRVEANFEQKYKYYIGDDGSGGDTQNSGAYIFRP
KDTVPIKTGVQVPLTILRGPILDEVHQQINSWIYQITRVYKGKDYVETEFIIGPIPVDDG
NGKELATEIVTNMATNRTFYTDSSGRDFIKRVRDYRSDWKLEVHQPVAGNYYPVNLGIYV
EDGGKELSILVDRSVGGSSIKDGQIELMLHRRLVYDDGRGVAEALDEPVCVNDQCEGLVI
QGKYYMKFDPRGEGARWRRTFGQEIYSPLLVAFSEQDRGDWVSSHVPKFSAMDPTYSLPD
NVALITLEELEDASVLLRLAHLYEAGEHKDLSALSSVDLRRVFRDRKIGKIIETNLSANQ
ERAAMEKKRLKWKVEGPLPDQNVVRGGPVDPSKLIVQLGPMEIRTFIISFNHR
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgtatccgttccggcggctagcccttctcctcgccgccgtcgtcttgctcggccccggc
ggcgccgcccatggggtgtacatcccctacaacacatcggtgggagtggtgaaggggaag
ctgaacgtgcacgtggttccccacacgcacgacgacgttggctggctcaagaccgtggac
cagtactacgtcggatccaataactccatccaggctgcgtgcgtgcagaacgtgctggat
tcgttggtgcctgcgctgctcaaggacaagaaccgcaaattcatctacgtcgagcaggcg
tttttccagagatggtggaggcagcagagcaacagtaccaaggataccgtgaaggggctg
gtcagctctggaaggctggaattcataaatgggggcatgtgcatgcatgatgaggccact
gtacactacgtcgacatgatagatcagactacactgggccacaggttcatcaaggaggag
ttcggccagatcccaaggattggctggcagatcgatccatttggtcactctgcggtccag
gcttatctcctcggtgcacaagtcgggttcgatgctttgtatttttcccggattgattac
caagatcgagaggtaaggaagggaacaaaaaaactggaagttgtctggaggagttccaag
accttcgggtcgtccgctgatatcttttctggtattttcccaataaactatgaaccacca
cctggtgagttctattttgaagttgatgatgaatccccccttgtccaggatgacccccag
ctctttgattacaatgttgaacgaagggtgaatgattttgttgctgcagcattggcacag
gcaaacatcacaaggacaaaccatatcatgtttacaatgggtacagacttcaaatatcaa
tatgctgaaagttggttcagacagatggacaaattaattcactatgtgaataaggatggc
cgtgtcaatgctttgtattccacaccttccatttacactgatgcaaaatttgctgcaaat
gtggcatggcctctcaagacagatgattttttcccatatgcagataaacccaattcatac
tggacaggttacttcacaagcagacctgccttaaaacgatatgtccgcttgatgagcgga
tattacttggcagctaggcagctggaatttttcaaagggagaagcaactcaggtgtcaca
accgatagtttagctgatgctctagctcttgctcagcatcacgatgctgttacaggaaca
gagaagcaacatgttgcaaatgattatgcaaagagattatcaattggatatcagaaagcc
gaggagcttgtctcgagttctcttgcttgtttgagtgagtccggctcaaaatctctttgt
tcgtccaaaacaaagaactttggacagtgtcctctcctaaacattacatactgcccccct
tccgagatgaacttctctcagggtagaagcctcgttgttcttgtatacaactctcttgga
tggaagcgagaggatgtccttcgcataccagttatgagtgactcagttgttgttcatgat
tctgagggaagagtaattgaatcgcaacttctgcccatagctaattcctcattgaacata
cgggacaaatatacaaaggcttacttgggtacattgcctgctgcaaaaccaaaattttgg
cttgctttccctgcttctgtaccaccacttggtttcaacacttattttgtttcgagtggg
aagagatcagaatctgtctcttcgacgtccactctttacttccagggaaataaaagtagc
aattttcaagttgggcaagggcatttgaaacttcaatacaatgcagctggggcattatct
gtgtattcagatagcaagactagggttgaagcaaatttcgagcagaagtacaagtattac
ataggagatgatggaagtggaggtgacacacagaattctggagcatacatatttcgccct
aaagataccgttcctatcaagactggtgttcaggttcctctcacaattctgcgtgggccc
atactggatgaagttcatcagcagatcaattcatggatatatcagatcactagagtttac
aagggaaaggactatgtggaaaccgaattcataattggaccaataccagtagacgatgga
aatggaaaggaactagcaactgaaatagttacaaacatggcaacaaacagaacattttat
accgattccagtggtcgtgacttcatcaaaagggtacgagattatcggtcggactggaag
ctcgaagtgcaccaacctgttgctggaaactattatcctgttaatcttggcatttatgtg
gaagatggtggaaaggagttgtccatacttgtagacaggtctgttggaggttccagcata
aaggatgggcagatagagctaatgctgcacaggaggctagtctatgatgacggccgtggt
gttgccgaagcattagatgaacctgtctgtgtcaatgatcaatgcgaaggactagttatt
caaggaaaatactatatgaaatttgacccacggggagaaggagctaggtggcgtcgtaca
ttcggccaggaaatatactcccctcttctcgttgctttctcagagcaggatagaggcgat
tgggtgagctcgcatgttcccaaattctctgcaatggatccgacttacagcttacctgat
aatgttgcattgattacccttgaggagcttgaagatgcaagtgttctgcttcggttggct
cacctatatgaggctggagaacataaggatctttctgctctatcgagcgtcgacctcaga
agagtattccgagatagaaagattggcaagatcatcgaaacaaacctatcagcaaaccaa
gagcgcgctgccatggagaagaagaggctgaaatggaaggtggaagggcctctccccgac
caaaatgtggtccgtggagggcctgtggatccttccaagctcatcgtccagctcgggccc
atggagatccgcacgttcattataagcttcaaccaccggtga
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