Lolium rigidum (rigid ryegrass): 124656440
Help
Entry
124656440 CDS
T09103
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00040
Pentose and glucuronate interconversions
lrd01100
Metabolic pathways
Module
lrd_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
124656440
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
124656440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
124656440
NCBI-ProteinID:
XP_047051141
LinkDB
All DBs
Position
5:133419292..133420818
Genome browser
AA seq
410 aa
AA seq
DB search
MEARSRLLLVLVALCVVSVVAAAAENVTVGQLSSYHGGAVAVSYNAKSYGAKGDGHTDDT
KALMAAWKVACGAAGTVTLTIPPGTYYIGPTQFHGPCKASALTFMLQGTLKAATDLKRFG
NDWIEFGWVKGLTVAGQNGIFDGQGAASWPFNKCPIRKDCKVLPTSVLFVNNQNTVVRDI
TSVNSKFFHFALLTNNNIKMLNLRINAPGTSPNTDGIHIERSTGVVIADTRIGTGDDCIS
IGQGNDNIDIQRVHCGPGHGMSVGSLGRYVGEGDVTRIHVKDMTFEGTMNGVRIKTWENS
PTKSVAAHMVFENMVMKDVQNPIIIDQKYCPYYNCEHKYVSGVTLQDITFRNIKGTASLP
VAVMLRCGVPCQGVVLQEIDLKYKGQGGASSKCENAKAKYVGYQYPKPCA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcggtcgcggctactgcttgtcttggttgcgctctgcgttgtatccgttgtg
gccgcggcggcggagaacgtgacggtggggcaactgtcgtcataccacgggggagcggtc
gcggtgagctacaacgccaagagctatggcgctaagggcgacggccacaccgacgatacc
aaggctctgatggcggcgtggaaggtggcgtgcggggccgccggcacggtgacgctcaca
atcccgccggggacgtactacatcgggccgacgcagtttcacggcccctgcaaggcctcc
gccctcaccttcatgctccaggggacgctcaaggcggcgacggatctgaagcgtttcggc
aacgactggatcgagttcggctgggtgaaaggcctcaccgtcgccggccagaacggcatc
ttcgacggccagggcgccgcctcatggcccttcaacaagtgccccatccgcaaggactgc
aaagtccttcccaccagcgttctgttcgtcaacaaccagaacacggtggtgcgggacatc
acgtccgtgaacagcaagttcttccacttcgcgctgctgaccaacaacaacatcaagatg
ctcaacctccggatcaacgcgccggggaccagcccgaacacggacggcatccacatcgag
cgtagcaccggcgtggtgatcgccgacacccgcatcggcaccggtgacgactgcatctcc
atcggccaggggaacgacaacatcgacatccaacgcgtccactgcggaccgggccacggc
atgagcgtcggcagcctcggacgatacgtcggcgagggcgacgtcacccgcatccacgtc
aaggacatgacctttgagggcaccatgaatggcgtccggatcaagacctgggagaactcc
cccaccaagagcgtcgccgcgcacatggtgttcgagaacatggtgatgaaggacgtgcag
aaccccatcatcatcgaccagaagtactgcccttactacaactgcgagcacaagtacgtc
tcaggcgtgacccttcaggacattaccttcaggaacatcaagggcacggcgtcgctgccg
gtcgccgtgatgctgcgctgcggcgttccatgccagggtgtggtgctgcaggaaatcgac
ctcaagtacaagggacagggtggcgcctcctcaaagtgcgagaacgcaaaggccaagtac
gtaggctaccagtacccaaagccatgcgcctag
DBGET
integrated database retrieval system