Lolium rigidum (rigid ryegrass): 124656475
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Entry
124656475 CDS
T09103
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124656475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrd02000
]
124656475
04147 Exosome [BR:
lrd04147
]
124656475
04090 CD molecules [BR:
lrd04090
]
124656475
Enzymes [BR:
lrd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
124656475
Transporters [BR:
lrd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124656475
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124656475
CD molecules [BR:
lrd04090
]
Proteins
124656475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
ABC_ATPase
SMC_N
AAA_22
AAA_29
AAA_16
RsgA_GTPase
DUF87
Zeta_toxin
AAA_30
DEAD
APS_kinase
Motif
Other DBs
NCBI-GeneID:
124656475
NCBI-ProteinID:
XP_047051167
LinkDB
All DBs
Position
5:complement(140480026..140488161)
Genome browser
AA seq
1255 aa
AA seq
DB search
MGGRDQEGEMNNINGGEAAASADRERQATTAASRVQLYRMFAFADRTDGALMAVGAASAV
ANGMAQPLMTFIFGDVIDAFGSAADSPEDVLHKVTKVIINFVYLGIGAGLISTLQVSCWT
ITGERQAARIRALYLKSILRQDIAFFDKDMSTGQVVERMSGDTFLIQDAIGEKVGLCIQL
LSTFFGGFIVAFVRGWLLALVMLSSIPPVAVAGAIMSRMMTKLSSRMQAKYGDAGDIVEQ
TIGTIRTVVSFNGEKQAITTYNKFIRKAYDSARREGAVSGLGVGSIMGILFCSYGLAVWY
GSKLIIDRGYNGGMVINVIMAVMVGAMSLGQAAPSITAFAEGQGAAYRMFKTIERQPDID
VYDTTGIMLEDIKGDVELKDVYFSYPTRPEHLVFHGFSLRVPSGMTIALVGESGSGKSTV
VSLVERFYDPQSGEILIDGIDIRRMNLGWIRGKIGLVSQEPVLFSSTIRENIAYGKDNLT
IEEIKSAIELANAANFIDKLPNGIETMVGERGTQLSGGQKQRIAIARAIIKNPRILLLDE
ATSALDMESERVVQEALDRVMLERTTIIVAHRLSTVKNADVISVLQNGKIVEQGSRAELV
KKPEGAYSQLIHLQETLQEAEAPNVDPGSTSKGSSFGHSGRHIVPAPFGLSDPMEFNNGQ
DLEETADKISSSRKKAPIRRLFYLNKPEALVLALGSITAAVHGTIFPVYGILISSAIKTF
YEPPAELLKDSRFWASMFVMLGASALVLIPIEYFLFGVAGGKLVERIRSLTFERIMHQDI
DWFDKPEHSSGAIGARLSTDALNVKRLVGDNLALNVQTVSTIIVGFTIAMVANWKLALII
TVVVPLVGFQAYAQMKFLKGPNKNAKLKYEEASQVATDAVGGIRTVASFCAEQKVMDAYV
QKCESPTRQGMKEGVVGGLGFGFSFLVFYLTYALCFYVGAKFVHDGKATFPEVFRVFFVL
VLATSGISRTSAIRADSTKANESAISVFKILDSRSKIDSSSEEGTVIARVRGNIEFKNVC
FYYPLRPSVQIFNDLSLNIPSGQTAALVGESGSGKSTAIALLERFYDPNSGKILLDGVEL
QTLKVSWLRLQIGLVAQEPVLFNDTIRANIAYGKQGEASEEEIVSAAEASNAHQFISGLP
DGYDTVVGERGIQLSGGQKQRVAIARAIVKDPKVLLLDEATSALDTESERVVQEALDRVM
VGRTTVVVAHRLSTVKGADIISVVKNGTIVEKGRHEELMRIKDGAYASLVELGAT
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgggagggagggatcaagagggggagatgaacaacatcaacggaggggaagcggcagcg
agcgctgatcgtgagaggcaggcgaccaccgcggcgtcgcgcgtgcagctgtaccgaatg
ttcgccttcgcggacaggacggacggggcgctgatggcggtgggcgcggcctcggcggtg
gccaacggcatggcgcagccgctcatgaccttcatcttcggcgacgtcatcgacgccttc
ggctccgccgccgactcgccggaggacgtgctgcacaaagtcaccaaggtgatcattaac
ttcgtttaccttggcattggagcaggactgatttcaacactccaggtgtcatgctggaca
atcactggagaaagacaggcagcacgaatcagagctttgtatctcaagtctattctcaga
caggacattgcattttttgacaaggatatgagcactgggcaagttgttgagaggatgtct
ggagacacattcctcattcaagatgccattggagaaaaggttggcttgtgcatacagctc
ctttctaccttttttggaggcttcattgttgcatttgtgagaggatggctcctggcactt
gttatgctctcaagcattccaccagtagctgtggcgggtgctattatgtcaaggatgatg
acaaagctctccagcagaatgcaagcaaaatatggtgatgctggagacattgttgagcaa
actattgggaccattcgaacggttgtttcatttaatggtgagaagcaagctataacaaca
tataacaagttcataagaaaggcatatgattctgctcgacgagaaggtgctgtcagtggc
ctcggagtaggttcaataatgggaatcttgttttgcagttatgggttagcagtttggtat
ggatctaaattgataatcgaccgaggatacaatggtggcatggttatcaatgttataatg
gctgttatggtcggtgcaatgtccttaggtcaggcagcaccatcaataacagcttttgca
gaaggtcaaggagcagcatacaggatgttcaagacaattgaaagacaaccagatattgat
gtatatgacaccacaggcatcatgttggaagacattaagggtgatgttgaactgaaagat
gtgtacttcagctatcctaccaggcctgaacatttggtatttcatggattctccttacga
gtaccaagtggcatgacaattgccctagttggagagagtggcagtggaaagtcaactgtg
gtcagtttggtggagagattctatgatccacagtctggggaaatcttgattgatggaatt
gacattagaagaatgaatcttggctggataagagggaaaattggtctagtcagccaagag
ccagtgttgttctcaagcacgatcagggaaaatattgcctacgggaaggataatcttact
attgaagagatcaaaagtgcaatcgagttagcaaatgcagcgaatttcattgataaattg
ccaaatggtattgaaacgatggttggggaacgtggtactcaactgtctggagggcagaag
caaagaatagcaattgctagagcgattataaaaaaccctaggatattgctacttgatgaa
gcaaccagcgcgctggatatggaatctgagagggtagttcaagaagctttggatagggta
atgttagaaaggactacaatcattgttgctcatcgcctaagcacagtaaagaatgctgat
gtcatatctgtcctacaaaatgggaagattgtagaacaaggttcacgtgcagaactggtg
aagaaacctgaaggtgcttactctcagctgattcacctgcaagagaccctgcaggaagca
gaagcccctaatgttgaccctgggtcaaccagtaaaggctcctcctttgggcatagtggt
agacatatcgttcctgctccatttggcctatctgatcccatggaattcaacaatggtcaa
gacctagaggagaccgcagacaaaatatctagtagtcgaaagaaagctccaattcgtcga
ctcttctatctgaataaaccagaggctctcgttcttgctcttggttcgataactgctgca
gtgcatggaaccatttttcctgtatatggaatattgatttcaagcgcaataaagacgttc
tatgaaccgccagcagaactactgaaggactcaaggttctgggcaagcatgtttgtcatg
ctgggtgcttccgcacttgttctgattccaatagagtacttcctgtttggagtagcaggt
gggaagcttgtggagcgcatacggtcgctgacatttgaacgtatcatgcaccaggacatt
gactggtttgataaacctgaacactccagtggagcaataggtgcaaggctatcgactgat
gctctgaacgtgaagcgacttgttggagacaacttagcacttaatgtccagactgtatca
accatcatagtaggtttcacgatagctatggtggcaaactggaagctggcattgattatc
acagtggtggttcctttggtaggtttccaagcctatgctcaaatgaagtttctgaaaggt
cccaataaaaatgcaaagttaaagtatgaggaagcaagtcaagtagcaaccgatgccgtt
ggaggcatcagaactgtcgcgtcgttttgtgcagagcagaaggtgatggatgcctatgta
cagaaatgtgagtctccaacaaggcaaggaatgaaggaaggtgttgttggtggcttggga
tttgggttctcattccttgtgttttaccttacctatgctctctgcttctacgtcggtgca
aagtttgtccatgatggaaaagcaacatttcctgaagtgtttcgggtcttcttcgtgcta
gttttggctactagtgggatctcacgaacaagcgcaatacgtgcggatagcaccaaggct
aatgaatcagccatctcggtattcaaaattcttgacagtcggtccaagatagattccagc
agcgaggagggtacggtcattgcacgtgtgaggggcaatattgagttcaagaacgtgtgc
ttctactaccccttacgcccaagtgttcaaattttcaacgatctatcgttgaacattcct
tctggacagacggctgcccttgttggagaaagtggaagtgggaagtccaccgcaattgcg
ctgctggagaggttctatgacccgaattcaggcaagatccttctcgacggtgtggaactt
cagaccctcaaggttagctggctccggctgcagatcgggctggtggcacaagagccagtg
ctgttcaacgacaccatccgcgccaacatagcctatggaaagcaaggggaggcctccgaa
gaagagatcgtctctgctgccgaagcatccaatgcacaccagttcatctccgggctgccc
gacgggtacgataccgtcgtcggcgagagagggatccagctgtcgggtggacagaagcag
cgtgtggccatcgcgagggccatcgtgaaggaccccaaggtgctcttgctggacgaggca
acgagcgctctggacactgagtcggagcgggtggtgcaggaggcgctagaccgggtgatg
gttgggaggacgacagtggtcgttgcgcatcgcttgtcgactgtaaaaggtgccgacatc
atcagcgtagtcaagaatggaacgatagtggagaaaggaaggcatgaagaactgatgcgg
ataaaagatggcgcctacgcgtcccttgttgagcttggcgccacttga
DBGET
integrated database retrieval system
