Lolium rigidum (rigid ryegrass): 124656555
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Entry
124656555 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: phytochrome A type 5-like
KO
K12120
phytochrome A
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
124656555
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GFIT
Motif
Pfam:
PHY
PAS_2
GAF
PAS
PAS_8
PAS_9
Motif
Other DBs
NCBI-GeneID:
124656555
NCBI-ProteinID:
XP_047051232
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Position
5:complement(153836418..153838770)
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AA seq
688 aa
AA seq
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MSSSRPISSSSSRNSQSSRARVLAKTELGAELNAAYEESGEYFDYSKMVEGQRTAPPVQP
GRPERVIAYLQHIQNGKMIQPFGCLLVLDEKSFSVIAFSENAPEMLTTVSHEEPSVDDPP
RLVIGTNLRSLFTDQGATELHRALGFADVSLLNPVSVQCQTSGKRFYAIAHRATGCLVVD
FEPVKSIEFPGTVVGDLQSYKLAAKAISKIQSLPGGSMKVLCNTVVKEIFDLTGYDRVMA
YKFHEDEHGEVFAEITKSGLETYLGLHYPATDIPQVSMFLFMNNRVRMICDCHARSIKVI
EDEALPFDISLLDSTLRASHGCHVQYMENMSSIACLVMAVVVNDNEEDDEIDSEQPAQQQ
QQQKKKLWGLLVCHHESPRYVPLPLRYACEFVAHVFSVHVNNEFELEEKLHEKRILRVQT
VLYEMLFREASPLTIVSGTPNIMDLVNCDGAALLYGGKVWRLCNAPTESQIRDISLWLSE
VHRDSTGLCTESLHDAGYPGASALCDRICGMAVAKINSKDALFWFRSCTADVIRWGGANN
DPSGMDGSRKLQPRLSFKAFLEVAKMKSLSWTDYEMDAIHSLQLILRGMFNDTIKPTWEA
NLDNQIADLKHDGLAEFXITSEMFRLMETATVPILAIDGNGLVNGWNQKAAELTGLRADD
YTRRHILTLVEESSIRASTMELVPKPKR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtcaaggcctatttccagctcttccagcaggaacagccagagctcccgggca
agggtattagcaaaaacagaacttggtgctgagctcaacgctgcatatgaagaatctggt
gaatacttcgactattccaagatggttgaaggccagcggaccgctccacctgtgcagcct
gggcggccggagagggtcatagcctacttgcagcacattcagaatggaaagatgatccaa
ccatttggttgcttgttggtccttgatgagaagagcttcagtgttatcgcgttcagtgag
aacgcgccagaaatgctaacaacggtcagccatgaagaacccagtgttgatgatccccca
aggctagttattggtacaaatctacggtctcttttcactgaccaaggtgccacggaactg
catagggcactagggtttgctgatgtttctttgctcaaccctgtctcagttcaatgccag
acctcaggaaagcgtttctatgccattgctcatcgagcaactggttgtttggtggtagac
tttgagcctgtaaagtctatagaatttcctggcactgttgttggggatttgcagtcttac
aagcttgctgccaaggcaatctccaaaatccagtcactgccaggtggaagcatgaaagtg
ctatgcaatactgtggttaaggaaatctttgatcttacaggatatgatagggttatggct
tataagtttcatgaagatgagcatggcgaggtatttgccgagatcacaaagtctggtctt
gagacttatctaggtctgcactatccagccacggatatccctcaagtatccatgtttctt
ttcatgaataacagggtaaggatgatttgtgattgccatgcgagatccataaaggtcatc
gaagatgaggcactcccctttgatattagcttgttggattcaacactcagggcctcacac
ggttgtcacgttcagtatatggagaacatgagctcgattgcatgccttgtcatggctgtt
gtggttaatgataatgaagaggatgatgaaatcgattctgaacaaccagcacaacaacag
cagcagcagaagaagaaactatggggcctccttgtttgccaccatgagagccccaggtat
gtccctttgccgctgcgttatgcttgtgagttcgtagcacatgtgttttctgtccatgtc
aacaacgagtttgaattagaggaaaagttgcacgagaagaggatactgagggtgcaaaca
gttctctatgagatgctgttcagagaagcctctcccctgactatagtatcagggacaccc
aatatcatggacctggtcaactgtgatggtgctgctcttttgtatgggggcaaagtatgg
cgcctgtgtaatgctccaactgagtctcagatacgtgatatttctttatggctgtcagaa
gttcacagggattccactggcctgtgtacagagagcctccatgatgctggctatccagga
gcttctgccctctgtgataggatttgtggaatggcagtggctaagatcaactcaaaggat
gcccttttttggttcaggtcatgtacagctgatgtgatcagatggggaggtgcaaacaat
gatccgtcgggcatggatggcagcagaaagttgcagcctaggttgtctttcaaagcattc
cttgaagttgccaagatgaagagtttgtcttggactgattatgagatggatgctattcat
tcgttgcaacttatacttcgagggatgttcaatgataccatcaagccaacctgggaagct
aatttagataaccagattgctgatctgaaacatgatgggcttgccgaatttnaaataacc
agtgaaatgtttcgtctaatggaaacagcaaccgttccaatcttggcaatagatggcaat
ggacttgtcaatgggtggaatcagaaagcagcggaattgacagggctaagagctgatgat
tatacaagaagacacatacttacccttgtggaggaatcttctatacgggcatccacaatg
gaactagttccaaaacctaaaaggtaa
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