KEGG   Lolium rigidum (rigid ryegrass): 124656570
Entry
124656570         CDS       T09103                                 
Name
(RefSeq) SKP1-like protein 11
  KO
K03094  S-phase kinase-associated protein 1
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03083  Polycomb repressive complex
lrd04120  Ubiquitin mediated proteolysis
lrd04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124656570
   04120 Ubiquitin mediated proteolysis
    124656570
  09126 Chromosome
   03083 Polycomb repressive complex
    124656570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lrd04131]
    124656570
   04121 Ubiquitin system [BR:lrd04121]
    124656570
   03036 Chromosome and associated proteins [BR:lrd03036]
    124656570
Membrane trafficking [BR:lrd04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    124656570
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     124656570
   Cul7 complex
     124656570
Chromosome and associated proteins [BR:lrd03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     124656570
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     124656570
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB DUF2960
Other DBs
NCBI-GeneID: 124656570
NCBI-ProteinID: XP_047051243
LinkDB
Position
5:156478912..156479427
AA seq 171 aa
MAATTADGSKVVGGGEKSNVDEESKMITLFSSDGERFEVTQEAAAMSQTIHHMMEDGCVD
DEGVHLPNVGSSILAMVIEYCNRHVASPDEKEDIRSFDAGFVNVEHHTLFDIIRAANYLD
VKELMDLCCQTVADSIKSKSVEEIRELFGIVNDFTPEEEAEIRKENQWAFE
NT seq 516 nt   +upstreamnt  +downstreamnt
atggcggcgacgacagcggacggaagcaaggtcgtgggcggcggcgagaagagcaacgtg
gacgaggagagcaagatgatcacgctgttcagctcggacggcgagcggttcgaggtgacc
caggaggcggcggccatgtcgcagaccatccaccacatgatggaggacggctgcgtggac
gacgagggcgtccatctccccaacgtgggatcctcgatcctcgccatggtcatcgagtac
tgcaacaggcacgtggccagccccgacgagaaggaggacatcaggagcttcgacgccggc
ttcgtgaatgtggagcatcacacgctgttcgacatcatccgcgccgccaactacctggac
gtcaaggagctcatggacctttgctgccagacggtggccgactcgatcaagagcaagtcg
gtcgaggagattcgcgagctgttcggcatcgtgaacgacttcacgcccgaggaggaggcg
gagatccgcaaggagaaccagtgggcgttcgagtag

DBGET integrated database retrieval system