Lolium rigidum (rigid ryegrass): 124657062
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Entry
124657062 CDS
T09103
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar protein 6-like
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124657062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124657062
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124657062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D3
Nrap_D4
Nrap
Nrap_D2
Nrap_D6
Fst_toxin
Motif
Other DBs
NCBI-GeneID:
124657062
NCBI-ProteinID:
XP_047051638
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All DBs
Position
5:complement(215013442..215022440)
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AA seq
1046 aa
AA seq
DB search
MVSAEYSVDLKLSTLLNEARPSAAXLRAAGEAVDAVAQLIKSVPPQQVAPEAASGFVRDL
GLAAEKLTFSFRPPEVVRLAGSHAAGAVARPDVAADLLVRLPKECFHEKDFLNHRYHAKR
CLYLCVIEKSLNSSHLIRKVSWSTFQDEARKPVLHVYPATEIAELPGFYVRIIPSASSLF
DVSKLNLSTRNNVRAYTKDGINQPTPKYNNSILEDMFLEENAESISCTFANWKALQEALV
LLKVWARQRTSIYAHDCLNGYLISAILVFLTMDSGGSIITRSMSRRQIFRVAINFFATSK
IWSRGLVLQPIKKRTITKEYIAHLVRTFDVAICDVSGHVNVAFRMTKSAFLELQDEAACT
LNCLDKCRDGGFEELFMTKVDFAAKFDSCLRVNLKGNSKVTALSFCLDDESWRVLEKDVQ
SLLQQGLTDRIKMIRVLWRSTPSEWNIMDGFSEFGTSPLVVGVMLSLLEKSYRFVDIGPN
PENRDEAIKFRKFWGKKAELRRFKDGAIAESTVWETETWEKHTIIKRISDYVLTKHLLLR
KEDLTHVVDQLDFCLLVGGKDPVSSSGALLGAFDNLTKQLRLLDDIPLKITTVQPLDSAF
RHTSVYPPEPHPLAYEKSSQKLPKFAPTCIRSLEVMIQLEGSGNWPLDPLAMEKTKSAFL
LRIGESLADRGMFVTASEDEVNVLTSGYSFLLKIFHERGLVVQKQAADANTQSDPSEDKE
LFLRSQHSSMINGLHGRYQVYGPVVRLAKRWISAHLFSSFISKEAIELVVAYLFLKPFPF
HAPSSRVAGFLRFLRLLSSFDWTFSPMVVDINNDFNLKDEKEINEKFMLSRRSYEQNPHD
IEPAMFLATSYDKSSEAWTKHSPSKSVLKRMASYAKSSAELLTDLIVHGQSGQYTWECLF
QTPLSNYDAVILLHQEKLCRPQHVLFPAETPNGKMVIKGNPSNDFHPYMPLSQSVVRSSR
DKLLLNFDPTTCFLRDLKCAFPVTFKLWHDSVGGDAIGLTWENSKKRGRDEAEEAMPDPA
SILKEVGDVGKGLVRSVYLLKAPKLQ
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgccgagtactccgtcgacctcaagctctccacgctcctcaatgaagcgcgc
ccgagcgccgccntcctccgcgccgccggggaggccgtggacgccgtcgctcagctcatc
aagagcgtgccgccgcagcaggtggcgccggaggccgcctcgggcttcgtcagggacctg
ggcctcgcggcggagaagctgacattttccttccggccgccggaggtggtgcggctcgca
gggagccacgcggctggggcggttgccaggcccgacgtcgccgccgaccttctcgtccgc
ttgcctaaggaatgctttcatgaaaaggatttcctgaatcaccggtaccatgcaaagagg
tgtctttacctctgcgtcatcgaaaagagcttgaattcgtctcatttgatccgcaaggtt
tcatggtctaccttccaagacgaggcacggaagcctgtcctccatgtatatccagcgaca
gaaatcgcagaacttcctgggttctatgtcaggataatcccgtccgcgagctctttattc
gatgtttcaaagctgaatttgtcaacaaggaacaatgtccgtgcatatacaaaagatggc
ataaaccaaccgacacctaagtacaataacagcatactggaggatatgtttctggaggaa
aatgcagaatctatcagctgcacctttgcaaattggaaagccttgcaagaggcattggtt
ttactaaaagtttgggcacgtcaaagaacttcaatatatgcacatgattgcctcaatggt
tacttaatatctgccatccttgtgtttcttacaatggactctggaggaagcataattact
agatccatgtccagaagacaaattttccgtgttgcaatcaatttttttgcaacttccaaa
atttggtcgagggggttggtgcttcagccaataaagaagcgtacgatcaccaaagagtac
attgctcatctcgtgagaacatttgatgttgccatatgtgatgtatctggccatgtcaat
gtggcatttcgaatgacaaagtcggcatttttagagcttcaagatgaggcagcttgcaca
cttaattgccttgataaatgcagagatggtggatttgaagagctttttatgaccaaggtt
gactttgctgctaagtttgattcatgcctgagggttaacttgaaggggaactccaaagtt
actgcgttaagcttttgcttggatgatgaatcttggcgagtacttgaaaaagatgtccag
tccttgctgcaacaaggacttacagatagaataaagatgatccgcgtcctgtggagaagc
acaccttctgaatggaatataatggatggtttctcagagtttggtaccagcccactggtt
gtcggcgtaatgcttagcttgttggagaagagttatcgttttgttgatattggtccaaat
cctgagaatcgtgatgaggctattaaatttagaaaattttggggaaagaaagctgaactt
aggagatttaaagatggggctattgctgaaagcacagtgtgggaaactgagacttgggag
aagcacacaatcatcaaaagaatctctgattatgtgcttaccaagcatttgctgttgcgg
aaggaagatttgactcatgttgttgatcagcttgacttttgccttttggttggcgggaaa
gatccagtgtcgtcttctggagctttgcttggagcctttgataatctaactaagcagttg
cgtctgctggatgatattcctcttaaaataaccactgtgcaacctctagactcagctttt
aggcacacatctgtgtatcctcctgaacctcatccattggcatatgaaaagagttctcag
aagctaccgaagtttgcaccaacttgtattcgatctttggaagtcatgattcagctcgag
gggtctggtaactggcccctggatcccttagccatggagaagacaaaatctgcatttctt
ctaagaattggtgaaagcctggcggatcgagggatgtttgtaacagccagtgaagatgag
gtcaatgttcttacatctggctattcgtttttgcttaaaatatttcatgaaagaggtctg
gtggtacaaaagcaagctgcagacgctaacacacaaagtgatccatcagaagataaggag
ctctttctgcggagccagcactcaagcatgatcaatggtctgcacggtcgttaccaagtg
tatgggccggtagtcaggctagcaaaaagatggatttctgcacatctattctcttcattt
atctcaaaggaggcaattgaattggtggttgcatacctatttttgaagccatttccattt
cacgccccatcttcacgggttgctgggtttcttaggttcctgcgattgctgtccagtttt
gactggaccttttcacccatggtcgtggacataaataatgacttcaacctgaaggatgag
aaagaaatcaatgaaaagtttatgctgagcagaagatcttatgagcaaaatcctcatgat
atagagcctgcaatgtttctggctacatcgtatgataaatcatctgaagcttggacaaaa
cattcaccaagcaagtcggttctcaaacggatggcttcatacgccaaaagcagcgctgag
ctgttaacagatctcatcgttcatggtcaatcaggccaatatacatgggagtgcctcttc
caaacacctttaagcaattatgatgctgttatactactacatcaagagaagctttgtcgt
cctcaacatgttctttttcctgctgagactcctaatggtaagatggtaatcaagggcaat
ccaagtaatgatttccacccttatatgccactcagtcaaagtgttgtgagaagctcaaga
gataaactcttgttaaatttcgaccctaccacatgcttcttaagagacttgaagtgtgca
ttccctgtgaccttcaaactgtggcatgattcggttggaggagatgcaattggtcttaca
tgggagaactcgaagaagcgtggcagagatgaggccgaggaagccatgccagatccagct
tctatactcaaggaggttggagacgtgggcaaaggtttggtgaggagtgtatatctcctc
aaagcacccaagcttcagtaa
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