Lolium rigidum (rigid ryegrass): 124657063
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Entry
124657063 CDS
T09103
Name
(RefSeq) nucleolar protein 6-like
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124657063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124657063
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124657063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D3
Nrap_D4
Nrap_D2
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
124657063
NCBI-ProteinID:
XP_047051639
LinkDB
All DBs
Position
5:215079049..215087957
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AA seq
1044 aa
AA seq
DB search
MVSAEYSVDLKLSTLLNEARPSAASLRAAGEAVDAVAQLIKSVPPQQVAPEAASGFVRDL
GLAAEKLTFSFRPPEVVRLAGSHAAGAVARPDVAADLLVRLPKECFHEKDFLNHRYHAKR
CLYLCVIEKSLNSSHLIRKVSWSTFQDEARKPVLHVYPEIAELPGFYVRIIPSASSLFDV
SKLNLSTRNNVRAYTKDGINQPTPKYNNSILEDMFLEENAESISCTFANWKALQEALVLL
KVWARQRTSIYAHDCLNGYLISAILVFLTMDSGGSIITRSMSRRQIFRVAINFFATSKIW
SRGLVLQPIKKRTITKEYIAHLVRTFDVAICDVSGHVNVAFRMTKSAFLELQDEAACTLN
CLDKCRDGGFEELFMTKVDFAAKFDSCLRVNLKGNSKVTALSFCLDDESWRVLEKDVQSL
LQQGLTDRIKMIRVLWRSTPSEWNIMDGFSEFGTSPLVVGVMLSLLEKSYRFVDIGPNPE
NRDEAIKFRKFWGKKAELRRFKDGAIAESTVWETETWEKHTIIKRISDYVLTKHLLLRKE
DLTHVVDQLDFCLLVGGKDPVSSSGALLGAFDNLTKQLRLLDDIPLKITTVQPLDSAFRH
TSVYPPEPHPLAYEKSSQKLPKFAPTCIRSLEVMIQLEGSGNWPLDPLAMEKTKSAFLLR
IGESLADRGMFVTASEDEVNVLTSGYSFLLKIFHERGLVVQKQAADANTQSDPSEDKELF
LRSQHSSMINGLHGRYQVYGPVVRLAKRWISAHLFSSFISKEAIELVVAYLFLKPFPFHA
PSSRVAGFLRFLRLLSSFDWTFSPMVVDINNDFNLKDEKEINEKFMLSRRSYEQNPHDIE
PAMFLATSYDKSSEAWTKHSPSKSVLKRMASYAKSSAELLTDLIVHGQSGQYTWECLFQT
PLSNYDAVILLHQEKLCRPQHVLFPADTPNGKMVIKGNPSNDFHPYMPLSQSVVRSSRDK
LLLNFDPTTCFLRDLKCAFPVTFKLWHDSVGGDAIGLTWENSKKRGRDEAEEAMPDPASI
LKEVGDVGKGLVRSVYLLKAPKLQ
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgccgagtactccgtcgacctcaagctctccacgctcctcaatgaagcgcgc
ccgagcgccgcctccctccgcgccgccggggaggccgtggacgccgtcgctcagctcatc
aagagcgtgccgccgcagcaggtggcgccggaggccgcctcgggcttcgtcagggacctg
ggcctcgcggcggagaagctgacattttccttccggccgccggaggtggtgcggctcgca
gggagccacgcggctggggcggttgccaggcccgacgtcgccgccgaccttctcgtccgc
ttgcctaaggaatgctttcatgaaaaggatttcctgaatcaccggtaccatgcaaagagg
tgtctttacctctgcgtcatcgaaaagagcttgaattcgtctcatttgatccgcaaggtt
tcatggtctaccttccaagacgaggcacggaagcctgtcctccatgtatatccagaaatc
gcagaacttcctgggttctatgtcaggataatcccgtccgcgagctctttattcgatgtt
tcaaagctgaatttgtcaacaaggaacaatgtccgtgcatatacaaaagatggcataaac
caaccgacacctaagtacaataacagcatactggaggatatgtttctggaggaaaatgca
gaatctatcagctgcacctttgcaaattggaaagccttgcaagaggcattggttttacta
aaagtttgggcacgtcaaagaacttcaatatatgcacatgattgcctcaatggttactta
atatctgccatccttgtgtttcttacaatggactctggaggaagcataattactagatcc
atgtccagaagacaaattttccgtgttgcaatcaatttttttgcaacttccaaaatttgg
tcgagggggttggtgcttcagccaataaagaagcgtacgatcaccaaagagtacattgct
catctcgtgagaacatttgatgttgccatatgtgatgtatctggccatgtcaatgtggca
tttcgaatgacaaagtcggcatttttagagcttcaagatgaggcagcttgcacacttaat
tgccttgataaatgcagagatggtggatttgaagagctttttatgaccaaggttgacttt
gctgctaagtttgattcatgcctgagggttaacttgaaggggaactccaaagttactgcg
ttaagcttttgcttggatgatgaatcttggcgagtacttgaaaaagatgtccagtccttg
ctgcaacaaggacttacagatagaataaagatgatccgcgtcctgtggagaagcacacct
tctgaatggaatataatggatggtttctcagagtttggtaccagcccactggttgtcggc
gtaatgcttagcttgttggagaagagttatcgttttgttgatattggtccaaatcctgag
aatcgtgatgaggctattaaatttagaaaattttggggaaagaaagctgaacttaggaga
tttaaagatggggctattgctgaaagcacagtgtgggaaactgagacttgggagaagcac
acaatcatcaaaagaatctctgattatgtgcttaccaagcatttgctgttgcggaaggaa
gatttgactcatgttgttgatcagcttgacttttgccttttggttggcgggaaagatcca
gtgtcgtcttctggagctttgcttggagcctttgataatctaactaagcagttgcgtctg
ctggatgatattcctcttaaaataaccactgtgcaacctctagactcagcttttaggcac
acatctgtgtatcctcctgaacctcatccattggcatatgaaaagagttctcagaagcta
ccgaagtttgcaccaacttgtattcgatctttggaagtcatgattcagctcgaggggtct
ggtaactggcccttggatcccttagccatggagaagacaaaatctgcatttcttctaaga
attggtgaaagcctggcggatcgagggatgtttgtaacagccagtgaagatgaggtcaat
gttcttacatctggctattcgtttttgcttaaaatatttcatgaaagaggtctggtggta
caaaagcaagctgcagacgctaacacacaaagtgatccatcagaagataaggagctcttt
ctgcggagccagcactcaagcatgatcaatggtctgcacggtcgttaccaagtgtatggg
ccggtagtcaggctagcaaaaagatggatttctgcacatctattctcttcatttatctca
aaggaggcaattgaattggtggttgcatacctatttttgaagccatttccatttcacgcc
ccatcttcacgggttgctgggtttcttaggttcctgcgattgctgtccagttttgactgg
accttttcacccatggtcgtggacataaataatgacttcaacctgaaggatgagaaagaa
atcaatgaaaagtttatgctgagcagaagatcttatgagcaaaatcctcatgatatagag
cctgcaatgtttctggctacatcgtatgataaatcgtctgaagcttggacaaaacattca
ccaagcaagtcggttctcaaacggatggcttcatacgccaaaagcagcgctgagctgtta
acagatctcatcgttcatggtcaatcaggccaatatacatgggagtgcctcttccaaaca
cctttaagcaattatgatgctgttatactactacatcaagagaagctttgtcgtcctcaa
catgttctttttcctgctgatactcctaatggtaagatggtaatcaagggcaatccaagt
aatgatttccacccttatatgccactcagtcaaagtgttgtgagaagctcaagagataaa
ctcttgttaaatttcgaccctaccacatgcttcttgcgagacttgaagtgcgcattccct
gtgaccttcaaactgtggcatgattcggttggaggagacgcaattggtcttacatgggag
aactcgaagaagcgtggcagagatgaggctgaggaagccatgccagatccagcttctata
ctcaaggaggttggagacgtgggtaaaggtttggtgaggagtgtatatctcctcaaagca
cccaagcttcagtaa
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