Lolium rigidum (rigid ryegrass): 124657692
Help
Entry
124657692 CDS
T09103
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
124657692
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124657692
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
124657692
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
DUF3713
Motif
Other DBs
NCBI-GeneID:
124657692
NCBI-ProteinID:
XP_047052162
LinkDB
All DBs
Position
5:complement(270896901..270905484)
Genome browser
AA seq
1213 aa
AA seq
DB search
MQPRRQQQSILSFLHPRRTPAGDPLGPGAGAGSTPERPPRPPAASSVDGIMERLARPPSQ
GRNKDASQVRHVEERALPGKNQRISDERPSALFSGPYSDEYSRETTLFADVSPLQEPLKY
STSSSMDKFVRASTLFPEPGSDETLFQECPKKLSSESPNNQYTKAASMFEDFDVQTPSQD
PLRRNFSGPFRGADTPLSEYGSDPTQHPSKKLPLVSSSGEHVRAATSLGLGSDDSPTMNH
SKKLFTGSADSSYIKATNLFAEFDSNGTPLQNQSKKFPVFLNAKHTGAPATLFPELDSVS
LKPETPLTRAVTPRAKRVQQDHSPLWGSNKKVKSAQCSPVEKMVHDEMAEGARSKFEWLN
PPNIRDANKRRPEDPLYDKRTLFIPPDALRKMSTSQKQYWTVKCKYMDVVLFFKVGKFYE
LYEVDAEVGQKELDWKMTISGVGKCRQVGISESGIDDAVEKLLARGYKVGRIEQMESAVQ
AKARGPNSVIERKLVHVSTPSTAADSNIGADAVHLLALKEVALASNGSRVYGFAFLDYAA
LKIWVGSLEDDDSSAALGALLVQVSPREIIYESSGLSRESRKSMLKYASAGSVKMQLTPL
SGADFSDASQIKMLVHSKGYFKASTDSWLSALDYSVNQEAVICALGGLIGHLTRLMLEDA
LKNGEVLPYNVYQTCLRMDGQTLVNLEVFSNSFDGGSSGTLYKHLNHCITASGKRLLRRW
ICHPLKDVNAINRRLDIVEGFIQNCGVGSITLEHLRKVPDLERLLGRVRSTVGLTSAVML
PFVGDKILKRRIKTFGMLIKGLRVGINLLSVLRREDHGISALSKSVDIPTLSSLDELVHQ
FEEAIDNDFPRYQDHDIEDDDANTLAILVELFVGKASEWSLVINAISVVDVLRSFAAMAL
SSSCTMCRPRILVKDKVPILRMKGLWHPYAFAESATGPVPNDLSLGEDLSGHNRFAFLLT
GPNMGGKSTIMRATCLAILLAQLGCYVPCTSCELTPADSIFTRLGATDRIMSGESTFLVE
CTETASVLQNATEDSLVLLDELGRGTSTFDGYAIAYAVFRHLVEQVRCRLLFATHYHPLT
KEFGSHPHVSLQHMACMLRPRSGGSGEKELTFLYRLASGASPESYGLQVATMAGIPMSTV
EKASVAGQMMKSKIARNFKSSEGRAEFSTLHEDWLRTILAIGGVKDGHLDEDTMDTMFCV
AQELKSHFRKGGR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgcggcggcagcagcagtccatcctctccttcctccacccgcgccggaccccg
gcgggggaccccctcggccccggcgccggcgccggctccacccccgagaggcccccgcgc
ccccccgccgcgtcctcggtcgacggcatcatggagaggctcgcgcggccgccgtcgcag
gggagaaacaaagacgcctcccaggttaggcatgttgaggagagagccttacctggtaaa
aatcaacgtatctcagatgagcgcccgagtgcattattctccggaccatacagtgacgag
tacagcagagaaaccacgctattcgcagatgtcagtcctctgcaggagccgctgaaatac
tccacaagttcttccatggataaatttgttagagcaagcacactgttcccagaacctggt
tcagatgaaactctgtttcaggagtgtccgaagaagttatcctcagagtctcccaataat
cagtacactaaagctgcttcaatgtttgaagactttgatgtacaaactccttcccaggac
cccttgaggaggaacttctctgggccgtttcgtggagcagatacacctttatcagagtat
ggttcagatccaactcagcatccgtcgaagaagttaccattggtctcctcaagtggtgaa
catgtcagagcagcaacatcacttggacttggttcagatgattctcctacaatgaatcac
tcaaagaagctattcactggatctgcagactcttcatacattaaggcaacaaatctgttt
gcggaatttgattcgaatggaactccactgcagaaccagtcgaaaaagttcccagttttt
ctgaacgctaaacacactggagcacctgctacactatttccggaacttgattctgtttct
ctgaagccagaaacgccactgacgcgagcagtgactcctcgtgccaagcgagttcaacag
gaccactctcctttgtggggttcaaacaagaaggtgaaatcagcccaatgttctccagtt
gagaagatggttcatgatgaaatggctgaaggtgcacgtagtaaatttgaatggctgaat
cctccgaatatcagggatgcaaataaaaggcggccagaggatccactttatgacaagaga
actcttttcattccacctgatgcgctgagaaagatgtcaacatctcaaaagcaatactgg
actgttaagtgcaaatatatggatgttgtcctctttttcaaagtgggaaaattttatgag
ctctatgaagtagatgccgaggttggtcaaaaggaacttgactggaaaatgactatcagt
ggtgtgggaaaatgccggcaggttggcatttcagagagtgggatagatgatgctgttgag
aagcttttagctcggggatataaagttggaaggatagaacaaatggaatctgcagtacag
gcaaaagctagaggaccaaattcagttattgaaaggaagttagttcatgtttccacacca
tcaactgctgctgacagcaatataggggctgatgctgttcatcttcttgcattgaaagag
gttgccctagcttctaatggttctcgggtgtatggatttgcttttctagattatgctgct
cttaaaatatgggtgggttcactcgaggatgatgattcatctgcagctttgggggctttg
ctggtgcaggtgtccccgagggagataatctatgaatcctcaggcctctcaagagaaagc
cgtaaatctatgttaaaatatgcctcagcaggctctgtgaaaatgcagctgaccccatta
tctggggcagatttctctgacgcttcacaaattaaaatgctagtgcattctaaaggatac
tttaaagcatcaacagattcctggttatctgcattggattattcagtgaatcaagaagca
gttatttgtgcacttggtggacttattggtcatttgactagacttatgctagaggatgct
ctaaaaaatggggaagtgttaccttacaacgtgtaccaaacttgtctaaggatggatggt
cagactcttgtgaacctggaggttttcagcaatagttttgacgggggctcatcaggtact
ctgtacaagcacctcaatcactgcataactgcatccggtaagcggcttctaagaagatgg
atatgccatccactaaaggatgtcaatgctataaataggaggcttgatattgttgagggc
ttcattcaaaattgtggggtaggctctattacacttgagcatctccggaaagttcctgac
cttgagagattacttggacgagttagatccacggtggggttaacatctgctgttatgttg
ccctttgttggagataagatattaaaaagacggattaaaacgttcggcatgcttatcaag
ggccttcgggttggaatcaacttattaagtgtcttacgaagagaggaccatggtatctca
gcactgtcaaagtcagtggatattccaaccctgagctctctcgatgaactagttcatcaa
tttgaagaggctatagacaatgactttccacggtaccaggatcacgatatcgaagacgat
gatgctaacaccttggctattttggtggaactatttgttggaaaagcttctgaatggtct
ctggtgatcaatgccatcagtgttgttgatgtccttaggtccttcgcagcaatggcattg
tcgtcatcttgtaccatgtgcagaccacgtattctggtgaaagacaaagtgccgatactt
cggatgaagggtctatggcatccctatgcttttgctgaaagtgcaactgggcctgtgcca
aatgatttatctcttggcgaggatttatctggtcataatcgctttgcatttttgttgact
ggtccaaatatgggaggcaagtctactataatgcgtgccacctgcttggctattttactt
gcccagcttggatgttatgtcccctgcacatcatgtgaattgacccctgctgactccatc
tttacgcggcttggtgcaacagatcggattatgtctggagaaagcacctttctcgtggaa
tgtactgagactgcatctgttcttcagaatgcaaccgaggattctcttgtcttgcttgat
gagcttggcagaggaactagcacatttgatggatatgcaatcgcatatgctgtattccgc
cacctggtggaacaggtgcgatgccgtctgctcttcgccacacactaccaccctctcacg
aaagagttcggctcccacccccatgtgagcctccagcacatggcttgcatgctcaggcca
aggagtggaggcagcggcgagaaggagctcaccttcctctaccggctcgcgtcaggcgcc
tccccggagagctatggcctgcaggtcgctacgatggcagggatcccgatgtccacagtg
gagaaggcgtcagtcgcgggccagatgatgaagtcgaagattgccaggaacttcaagtcg
agcgaagggcgagcggagttctccaccctccatgaggactggctgagaacaatcctggcg
atcggtggtgttaaggatgggcacctggacgaggacaccatggacacgatgttctgcgtc
gcccaggagcttaagtctcacttcaggaaaggaggaagatga
DBGET
integrated database retrieval system
