Lolium rigidum (rigid ryegrass): 124657884
Help
Entry
124657884 CDS
T09103
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2-like
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124657884
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124657884
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124657884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
124657884
NCBI-ProteinID:
XP_047052316
LinkDB
All DBs
Position
5:complement(245888153..245893227)
Genome browser
AA seq
624 aa
AA seq
DB search
MVKIVTYNVNGLRPRVAQHGSLRRLLDSLDADIICFQETKLSRQDLSGDVIMAEGYEAFI
SCNRTSRGRGAYSGVATFCRVTSAFSSQEVALPVAAQEGFAGFQGSAKDSETIGDFVLQM
PVEEEGLGEITREELLRLDNEGRCIITDHGHFVLFNLYGPAIGEDDEERVRFKLLFYKIL
QKRWEYLLALGKRVFIVGDLNIAPGSIDRCDAPPGFEKQMFREWLRSMLRENDGPFFDAF
RSKHPERTGAYTCFNQKVGAEEYNYGSRIDHILISGSCFHNCNSVDNHSIFHCHVEDCEI
MNHFKRSGDTETISKWKGGRSSKLEGSDHIPVYIILNGIPELPVHNTPSSAARYLPEIRG
RQQSIVSFLSKGKICEVEGGPGLNMSQDQANESCCTDDLESKSIFKEESPTGITEFSKGG
DLPSSTSKRRNLDHWIHEGPSGNSQNSNATLLASHGMKASFSSIKSMSNKKNKHNISSQP
TIKSFFRRPETRAEDANINSLVSAADTVPGMHELCYPKDDSLPENIQCTAAAEVDQDSSI
SCSLSTDNCNVATLEWQRIQQRMKMTLPLCKGHREPCIPRSVKKGSNIGRQFYVCGRAQG
PSSNPAANCNHFQWASVKSKGKRQ
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatagtgacgtacaacgtgaacgggctgcggccgcgggtggcgcagcacggc
tcgctccgccgcctcctggactccctcgacgccgacatcatctgcttccaggagacgaaa
ctgtcgaggcaggacttgtctggggatgtcataatggcggagggatacgaggcttttatt
tcgtgcaatcgtacctcgagagggcgtggagcatactccggtgtagcaacattttgccgg
gtaacatcggcattctccagtcaggaagttgcgttgccagtagcagctcaagaaggcttt
gctggatttcagggctctgcaaaagacagtgaaactattggggattttgtacttcaaatg
cctgtggaagaggaaggtcttggtgaaataacaagagaggagctactcaggctggacaat
gaggggcgatgtataatcactgaccatggacattttgttctttttaatttatatggccca
gccattggcgaagatgatgaagaaagagttcgttttaagctactattttacaagatactg
cagaaacgatgggaatacctattggctctggggaagagagttttcatcgttggagatctg
aatattgctcctggttctatagataggtgtgacgcccctcctggattcgagaagcaaatg
ttccgggaatggctgaggtccatgctaagagagaatgatggtccattttttgatgctttc
agatcaaaacaccctgaaaggactggagcttatacttgttttaatcaaaaagttggagct
gaagaatacaattatggttctagaattgatcacattctaatttctggttcctgtttccat
aattgcaattctgtggacaaccatagcatttttcactgccatgtggaggattgcgagata
atgaatcatttcaaaagaagtggggatacggaaactatctcaaagtggaaaggagggaga
agtagtaaactagaaggttctgatcatattccagtgtatattatattgaatggaatacct
gaacttccagtccataataccccatcatcagctgcaaggtatctgccagaaatccgtgga
cggcaacagagtatagtatcattcctcagtaaagggaaaatttgtgaagttgaaggtggc
ccaggtttaaatatgtcccaggatcaagcaaatgaaagctgctgtactgatgacctggaa
agcaaaagtatattcaaggaagaatcaccaactggtataaccgagttttctaaaggtggt
gaccttcctagttctacgtcaaagcgaaggaatcttgatcattggatacatgaaggccca
agcggcaactcccaaaatagtaatgcaacattactggcatcacatggtatgaaagcttct
ttttctagcatcaagtctatgtcaaacaagaagaacaaacataatatatcctcacagcca
acaatcaaatcattttttcgaagaccagagacaagggcagaggatgccaatatcaatagc
ttagttagtgcagcagatacagtacctggtatgcatgaattatgttatccaaaggatgat
agtctgccggagaacattcagtgtacagctgcagctgaagtagatcaggacagctctata
tcatgttcactttcaactgacaactgtaatgttgcaacattggagtggcaaagaatacaa
cagagaatgaagatgaccctaccactttgcaaaggacatcgtgaaccttgcattccaagg
tctgtgaagaagggctccaatattggtcgccaattctatgtctgtggccgtgctcaggga
ccttcatcaaatccagcagctaactgcaaccattttcagtgggcctctgtaaaatctaaa
ggaaagcggcaatga
DBGET
integrated database retrieval system
