Lolium rigidum (rigid ryegrass): 124657988
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Entry
124657988 CDS
T09103
Name
(RefSeq) uncharacterized protein LOC124657988
KO
K20558
transcription factor SPEECHLESS
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
124657988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124657988
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124657988
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GFIT
Motif
Pfam:
zf-RVT
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
124657988
NCBI-ProteinID:
XP_047052401
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Position
1:260961055..260981739
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AA seq
660 aa
AA seq
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MTGATKPWSGLLEQPSHADQALFASMTEVTIGNGMRTSFWADSWVGEPLKKQWPLLFEVS
RRKNRTVADALENDHWLMDLRGRISIDLLLDFISLRQILRGCNVDPDIEDTFRWKSTSGN
YSASSAYALQFEETQQSPLRHIWPAWAPPKCKFFFWLLLQRRVFTADRLLHFGMPNQYFC
PLCRRNLETPAHLFAECPWAREVWDHTAGLFACPAIRQPDGDDRALSWAVSKLAGTDRRA
ASYLCHFVSSHDHLPKANGRTLAPCLKEAKLCLANIPLAHNILPHTTLLAASKHKVVSLH
TCKASIMGDALCDQLLVDVDGEFQLPSDADDLFRILETWEDCVNGPAAALSPTTGGHGRG
GPGLLQAGPAPGNKVSKRRAPQDEYDGTAKTQKRQRYSPEEGGGATPKTPHITVERNRRK
QMNEHLTVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVKQSLEAKKQRKVYTEHVLSP
RPLSTPPLSPLLKSTPPLSPRLVIPISPARTPPTPGSPYILRPLPPPLISGSTYVSPAMT
PTGHDPAASSYLPSLDAITAELSVYANRQALLLPPTNPLPDVRVEFAGANLVLKTVSHRA
PGQAVKIIAALEGRAPALEILHAKISTIDDTDVNAFTVKIGIECALSAEELVQEIQQTFS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaccggggcgaccaaaccttggtcggggctgttggagcagccatcccatgctgaccag
gccttgttcgcctcgatgactgaggtcaccattggaaacggcatgagaactagcttctgg
gctgacagttgggtcggggaaccacttaagaaacaatggcccctgctcttcgaggtttct
cggcgcaagaacaggacggtggccgatgctctcgagaacgaccactggctcatggacctt
cgcgggaggatctccatcgaccttttgctcgacttcatctcacttcggcaaatattgcga
ggctgcaacgtcgaccctgatattgaagacacctttcggtggaagtccacgtccgggaat
tactccgcctcctcagcatatgcgctacagttcgaagagacccaacagtccccgctacgt
catatttggccggcctgggcgcccccaaagtgcaagttcttcttctggttgttgttgcag
cgccgggtcttcacagcggataggctgcttcattttgggatgccgaaccaatacttctgt
cctctttgtcgaagaaacctcgagaccccggcgcatctcttcgcagaatgcccttgggct
agggaggtctgggatcacactgcgggtttgttcgcctgcccagccattcggcaacctgat
ggtgacgaccgagccctatcctgggcggtctccaagctggcgggtactgaccgtcgagct
gcctcgtatttatgtcatttcgtctcttctcatgaccatcttccaaaagcaaacggccga
actctagctccttgcttaaaagaagcaaagctgtgtctagccaatattccacttgcgcac
aacatccttccccacaccactctgctagcagctagcaagcacaaggtggtaagtttgcat
acgtgcaaagcatcgatcatgggtgatgcgctgtgcgatcagctcctcgtggacgttgac
ggcgagttccagctcccctccgacgccgacgacctattcaggatcctggagacgtgggag
gactgcgtgaacggccctgccgccgcgttaagccccaccaccggcggccacggcagaggt
ggtcctgggcttctgcaggctggtcctgcgccgggaaacaaagtcagcaagcgacgagcg
ccgcaggacgaatatgacggcaccgcaaagacgcagaagaggcagagatactcgccggag
gagggaggcggcgcgacgcccaagacgccgcacatcacggtggagcgcaaccggaggaag
cagatgaacgagcacctgacagtgctgcggtctctcatgccatgtttctatgtcaagcgg
ggtgaccaggcatcaatcataggaggtgtggtggactacatcaaggagctgcagcaagtg
aagcagtcgctggaggccaagaagcagcgcaaggtctacaccgagcatgtcctcagcccg
cggccgctatccacgccgccgctaagcccgctcctcaaatccacgccgccgctgagcccg
cgcctcgtcatcccgatcagccctgcaaggacgccgccgacgccaggcagcccctacatt
ctccggcccctcccaccaccactgatctccggctccacatacgtgtcaccagcgatgacg
ccaaccggccacgatcctgcggcctcctcctacctcccctcgctcgacgccatcaccgcc
gagctgtcggtctacgccaaccggcaggcgctgctgctgcccccgaccaacccactcccc
gacgtgagggtggagttcgccggcgcgaacctggtgctgaagacggtgtcgcaccgcgcg
ccggggcaggcggtcaagatcatcgccgcgctggagggacgggcgccggcgctggagatc
ctccacgccaagatcagcaccatcgacgacacagacgtcaacgccttcaccgtcaagatt
ggaatcgagtgtgcgctcagtgcggaagagctggtgcaagaaattcagcaaacgttctcg
taa
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