Lolium rigidum (rigid ryegrass): 124658334
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Entry
124658334 CDS
T09103
Name
(RefSeq) probable ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124658334
Enzymes [BR:
lrd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
124658334
Ribosome biogenesis [BR:
lrd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
124658334
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
FtsJ
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
124658334
NCBI-ProteinID:
XP_047052644
LinkDB
All DBs
Position
5:222847447..222854726
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AA seq
567 aa
AA seq
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MEGSALALSQFRTRLGSPLLLSADASSAARSSSGRSRSSRYDTGAPPSRAGRGRVWKRDD
PEASPRRAGISGIPKLHPKFSNKGAGGTNKVPVINFEVSHHRAVAAVRLLRADKGKAFVD
LLNEKANDSAENEMGYVERTLGFSTRNLDDRDIRLVTVIVAGTVRWKRYIDFLIMSLCSD
EKVFSKMEPLLLQILRIGFFEILKLNVPAYAVVDENVRLAKVALRPGAGNMVNAILRKLL
SLKETDSLPLPKIEGDDRAQARALSIIYSHPVWMVRRWIRFLGKEEALKLMDWNNSDPYF
SLRVNTTNGYTRDDLINRLDDLQVHYEKSIMDEFVRIREGMQAVLQAGLLKEGMCAVQDE
SAGLVVSVVDPQPGETIMDCCAAPGGKTLFMASRLAGQGKIWALDINKGRLRILMEAAKC
HNLDDIITDVHGDLRLYAKESTAKYDKVLLDAPCSGLGVLSKRADLRWNRQFEDLEELIC
LQDELLDSASLLVKPGGVLIYSTCSIDHEENENRITAFVQRHPEFTPQSVHGYVPAEFIT
DEGFYSSSPTKHSLDGAFAARLVRSLH
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggagggaagtgcgctcgccctctcgcaattccgcacgcggctcggctcgccgctcctc
ctctccgcggacgccagctccgccgcgcgcagcagctcagggaggagcaggtcctccagg
tacgacacgggagcgcctccgagcagagcaggaaggggtagggtttggaagcgtgatgat
ccggaggcttcacctcgccgagcagggattagtggaattccaaagcttcatccgaaattc
tctaataaaggagcaggtgggacaaataaggttccggttattaatttcgaggtttctcac
cacagagcagtcgcagcggtgaggttgctaagagctgacaaggggaaggcgtttgttgat
cttttaaatgagaaagcaaacgattctgcggagaatgagatgggctatgtagaaaggacg
ttaggattcagtacacggaatttggatgacagggatataagactggttactgtcatagta
gctggaactgtacgttggaaacgctacatcgattttcttatcatgtcactctgtagtgac
gagaaggtgttcagcaaaatggaaccactgctgctgcagatactacgaattggcttcttt
gaaattctcaaacttaacgtaccagcttatgcagtcgttgatgagaatgtaagacttgcg
aaagtagctttaaggcctggtgccgggaacatggtgaatgcaattctgcgcaaacttcta
tcactgaaggagacagactctcttcctcttccaaagatagaaggtgatgatcgtgcccaa
gctcgtgcactttccataatttattctcatcctgtttggatggtgagaagatggatccga
tttcttggaaaagaagaagctctaaaattgatggattggaataacagtgacccttatttt
agtttaagggtgaacacaacaaatggctatacaagggatgaccttattaaccgattggac
gatttgcaggttcattacgaaaagtcaattatggatgaatttgtccgcattcgtgagggc
atgcaggcggtcttacaagcgggattactgaaagaaggcatgtgtgctgtgcaggatgag
agcgcaggtcttgttgtgtctgtggtcgatccacaacctggcgaaacaatcatggattgt
tgtgctgcacctggcgggaaaactttgttcatggcatcccgactggcaggacaagggaag
atatgggctcttgacataaacaaaggtcgcttgagaattctcatggaggcagcaaagtgc
cacaaccttgatgatataatcactgatgtccacggtgatcttcgactatatgctaaggaa
agcactgccaaatatgacaaggtattattggatgctccatgctctgggctgggcgtcctt
tccaagagggcagacttgcgttggaatcgacaatttgaagatctggaggagttgatatgt
ttgcaagatgagctccttgattcagcatcactgttggtaaagcctggtggtgtactaatc
tacagtacatgttccattgatcatgaagaaaacgagaaccggattactgcttttgttcag
agacatccggagtttaccccgcagagtgtacatggatatgttcctgcagaatttatcaca
gatgaaggtttctattcctcaagtccaactaaacactctctggatggggcatttgctgct
cgtcttgtccggtcattgcactag
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