Lolium rigidum (rigid ryegrass): 124658741
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Entry
124658741 CDS
T09103
Name
(RefSeq) putative heat stress transcription factor A-6a
KO
K09419
heat shock transcription factor, other eukaryote
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124658741
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
124658741
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
DUF7801
DUF6026
Motif
Other DBs
NCBI-GeneID:
124658741
NCBI-ProteinID:
XP_047052773
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All DBs
Position
1:complement(269048849..269050247)
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AA seq
375 aa
AA seq
DB search
MDSLTAVMTTDIKQEEPEMVVLDDDDGDDCRLRAPTPLDLAAAAAVAPFLAKTFDMVEDP
ATDAVVSWGAARNSFVVWDPHAFAARLLPLHFKHANFSSFLRQLNTYGFRKVNPDRWEFA
NAGFLGGQRHLLAGIRRRRGADTGRRPAASSSASSCAAEAGVIGVVDGELERLRRDREAL
KQELARLRVQQEASRATLMEMERRVLGTERRQEQCKAFLVRAIRNPSFLTSLARRNALAA
GDAVPVVKGKNKRRMLDHIPSSPAAAAATEDGFTFEELALAAGVDVEAGVPTVKTESAGG
ITTDMIWYELLGDEQAEMDVEVEDLVTAAAAAAAEEMEPWEGMGEEEDPDDGICQELRMR
AVEGCESDYAPGSGG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggactccctcaccgccgtaatgacgacggacatcaagcaggaggagcccgagatggtg
gtgctggacgacgacgacggcgacgactgccgcctgcgcgcgccgacgccgttggacctg
gcggcggccgcggcggtggcgccgttcctggccaagacgttcgacatggtggaggacccg
gcgacggacgcggtggtgtcgtggggcgcggcgcggaacagcttcgtggtgtgggatccc
cacgccttcgccgcccgcctcctcccgctccacttcaagcacgccaacttctccagcttc
ctccgccagctcaacacctacggattccgcaaggtgaacccggacaggtgggagttcgcc
aacgcgggcttcctcggcgggcagcggcacctcctcgcgggcatccgccgccggcgcggc
gccgacaccggccgccggcccgcggcctcctcgtctgcgtcctcgtgcgcggcggaggcc
ggcgtcatcggcgtcgtggacggggagctggagcggctgcggcgggaccgggaggcgctc
aagcaggagctggcgcggctcagggtgcagcaggaggcgtcgcgcgcgacgctgatggag
atggagcgtcgcgtgctgggcaccgagcggcggcaggagcagtgcaaggccttcctcgtg
cgtgcgatcaggaacccgagttttctgaccagcctggcacgccgcaacgcactcgccgcc
ggcgacgcggtgcccgtcgtcaagggcaagaacaagcggcggatgctcgaccacatcccg
tcgtctccggcggcggcggcggcgacggaggatggtttcaccttcgaggagcttgcactg
gcggccggtgtcgacgtcgaggcgggcgtaccgaccgtgaaaactgagagcgcgggcggc
ataacgacggacatgatttggtacgagctgctcggggacgagcaggcggagatggacgtc
gaggtggaagacctcgtcaccgccgccgccgcggcagcggcggaggagatggagccgtgg
gaggggatgggcgaggaggaggatccggatgatggtatctgtcaggaactcaggatgcga
gctgtggaagggtgtgagagcgactatgctccgggttcaggtggctag
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