Lolium rigidum (rigid ryegrass): 124658932
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Entry
124658932 CDS
T09103
Name
(RefSeq) homeobox-leucine zipper protein ROC9
KO
K09338
homeobox-leucine zipper protein
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lrd03000
]
124658932
Transcription factors [BR:
lrd03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
124658932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Kazrin
Death_3
Motif
Other DBs
NCBI-GeneID:
124658932
NCBI-ProteinID:
XP_047052873
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All DBs
Position
6:complement(113190511..113196577)
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AA seq
761 aa
AA seq
DB search
MGSSRPRTKDFFAAPTLSLSLAGAFGRNVPAATSGEEVEEGDEGDGGIRDEHLGKEVEIS
SENTGQGSQSGDGEEEDHYDGGNRKKRSRKSYHRHTAEQVRIMEGVFKESPHPDEKQRQQ
LSKQLGLSPRQVKFWFQNRRTQIKAIQERHENSLLKSELENLHKEIRAVREQNKRPLHCA
NCGVAAGSGGDFDAAASNKEQQLQLENARLRAEVEKLRGKQEKAAADGAISPASPPFCTG
TIQTKDNRSPLEVYGGGLTGRDKQSILELVGRALEELKTMSSSGEPLWVRSVETGRDILN
YDEYVRLFRRDDDDAGDLDQRGAWSVEASRESGVVYLDTTQLVHAFMDANQWKELFPSMI
AKASTLDVIRSGEDNDQDGVVQLMLAEVQTLTPMVPTRELCFARYCKKLAPEKWAIVDAS
FGKAGGGADASSPVITSWKNASGCIIEEQTNGHSRVTWVEHAKHREPAVVPSTYRAVTAS
GLAFGARRWLAALRLQCERMVFSVATNVPTRDSNGVSTLAGRRSVLKLAHRMTLSLCRVI
GGSRDLAWSRAPRAGAGDVWLTSRRNAGDPGEPQGLIAVAVLSTWLPVSPKALLDFLKDE
SRRPEWDVTLHGRAVQSRVSVAKGKDRGNCVTAYAPTSAEEQSGGAWIVQDVCTNSCESI
VAYAPVDAAVLQPVIGGHDSSGVAVLPCGVGIMPDGLEFRPAVITSRKEDGVAGAAGSLV
TVACQVLASSSPMAALSPESAETVTSLVSCTLRDIRKSLGC
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggggagcagccggccgcgcaccaaggacttcttcgcagctccgacgctctccctctcg
ctcgcaggtgcgtttggcaggaatgttccggcggcgacgagcggcgaagaagtggaagaa
ggcgacgagggggacggcgggatcagagatgagcatctgggtaaggaggtggagatcagt
agcgagaacacggggcagggaagccagtcaggtgacggggaagaagaagatcattacgat
gggggtaataggaagaagaggagcaggaagagctaccacaggcacaccgctgagcaagtt
aggatcatggaaggggtattcaaagagtcgccacatccagatgaaaagcagcggcagcaa
ctgagcaagcagctaggactgtctccacggcaagtcaagttctggtttcagaaccgacga
actcagatcaaggcgattcaggagcggcacgagaactcgctgctcaagtcggagctggag
aatctccacaaggagatccgcgccgtgagagagcagaacaagagaccactacactgtgcc
aactgcggcgtcgcagcaggctcgggcggtgacttcgacgctgccgcgtccaacaaagag
cagcagctgcagctagagaacgccaggctcagagcagaggtagagaagctacgagggaag
caagaaaaagccgcggccgacggagccatctccccggcctcgccgccgttctgcaccggc
accatccagacgaaggacaaccggagtccgctggaagtttacggcggcggactcacgggc
cgtgacaagcagagcatcttggagctggttggccgcgcgctggaggagctgaagacgatg
tcttcctccggtgagcctctgtgggtgcggagcgtggagaccggccgggacattctgaac
tacgacgagtacgtgcgcttgttccggcgtgatgatgacgatgccggcgatctggatcag
cggggcgcgtggtcggtcgaggcgtcgagggaaagcggggttgtttaccttgacacgacg
cagctcgtgcatgctttcatggatgcgaaccaatggaaagagctattcccttccatgatc
gcaaaggcgtcgacgctcgatgtgatccgttcaggcgaggacaacgaccaagacggcgtc
gttcaactgatgcttgcagaggttcagacactgacaccgatggtacccacaagggagctc
tgcttcgcccgctactgcaagaagctggccccggagaaatgggccatcgtggacgcgtcc
tttggcaaggccggaggcggcgccgacgcgtcctcgccggtgatcacgtcctggaagaac
gcctcgggatgcatcatcgaggagcagacaaacggtcattccagggtgacctgggttgag
cacgccaaacaccgtgagcccgccgtggttccgtcgacgtacagggcggtcaccgcgagc
ggcctggcgttcggcgcgaggcgctggctggcggcgctccggctccagtgcgagaggatg
gtcttctcggtggcgactaacgtcccgacgagggactccaacggggtctccacgctcgcg
ggcaggaggagcgtcctgaagctggcgcaccggatgacgttgagcctctgccgcgtcatc
ggcgggtcgcgtgacctggcgtggagcagggcgccgagagccggcgccggcgacgtctgg
ctgacgtctcggaggaacgccggcgaccccggcgagccgcaggggctgatcgccgttgcc
gtgctgtccacgtggctcccggtcagccccaaggctctcctggatttcctgaaggacgaa
tcgcgtcgaccagagtgggatgtcacgctgcacggacgtgctgttcagagtcgcgtgagc
gtggcgaaggggaaggaccgtggcaactgcgtcaccgcctacgctcccacatcggcagaa
gaacagagcggcggcgcgtggatcgtccaggacgtgtgcaccaactcgtgcgagtcgatc
gtcgcgtacgcgccggtcgacgccgccgtcctgcagccggtcatcggcgggcacgactcg
agcggcgtcgccgtcctgccgtgcggtgtcgggatcatgccggacgggctggagttcagg
cccgcggtgatcacctccaggaaggaagacggcgtggccggagctgcggggtccctcgtc
actgttgcgtgccaggtcctcgccagctcgtcgccgatggccgcgctttcgccggagtcg
gcggagaccgtgacgagtctggtgtcctgcacgctgcgcgacatcaggaaatccttgggg
tgctaa
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