Lolium rigidum (rigid ryegrass): 124658933
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Entry
124658933 CDS
T09103
Name
(RefSeq) coatomer subunit beta-2
KO
K17301
coatomer subunit beta
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124658933
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124658933
Membrane trafficking [BR:
lrd04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
124658933
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124658933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
Coatomer_g_Cpla
Cnd1
Arm
INTS1_R4
RAG2
Motif
Other DBs
NCBI-GeneID:
124658933
NCBI-ProteinID:
XP_047052874
LinkDB
All DBs
Position
6:209424453..209430675
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AA seq
950 aa
AA seq
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MDKPSTLLVHFDKGSAAMANEIKADLEGSDVAAKVEAMKRAVMLLLNGETLPTLFITVVR
YVLPSEDHTIQKLLLLYLEIIDKRDSAGRVLPEMILICQNLRNNLQHPNEYIRGVTLRFL
CRLSEPEVLEPLVPSILENLEHRHHFIRRHALSAISAIYRLPHGDQLIPDAPELVERALA
SEQDASARRNAFLMLCLCGQERAVAYLFSNAERVTEWPDLLQMAAVDLIRKVCRSPNRAD
KGRYIKIIISLLSSPSTAVVYECAGALVSLSSAPTAVRAAANTYCELLASQSDNNVRLIL
LDRLNELRTSHRDVMVDVVMDVLRALASPNLDVKRKVLDLVLDLLTPRNVEEVVLYLKKE
VVKTQSGELEKGGEYRQMLVQAIHSCAVEYPEVAGSVVHLLMDFLGDTNVAAAVDVVLFV
REIIETNPKLRVSMIQRLSDTFYQIRASRVCSIALWILGEYSLSLAEVESAISTIKQCLG
DVPFFTVSEEGETTDSSKPAQQMVNSVTVSSRRPVVLADGTYATQSAATETISTPSVTPG
SLSSTLNLRSLILSGDFFLAAVVACTLTKLVLRLEEVQPSKLEANKACTGALLVMTSILQ
LGLSSYLPQPIDNDSYDRIVLCVRLLCNTGDDVRKIWLQSCRQSFAKMLAEKQFRETEEM
KAKAQISHAQPDDLIDFYHLKSRRGMSQLELEDEVQDDLKAATGGFTKETDDANRLNRIL
QLTGFSDPVYAEAFVTVHHYDIVLDVTVINRTKETLQNLCLELATMGDLKLVDRPQNYTL
APESSKQIRANIKVSSTETGVIFGNIVYETSNVMERSVVVLNDIHIDIMDYISPATCADV
TFRNMWAEFEWENKVAVNTVIQDEKEFLNHVIKSTNMKCLTPPSALDGECGFLAANLYAK
SVFGEDALVNISIEKQADGKLSGYIRIRSKTQGIALSLGDKITLKQKGSS
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggacaagccgagcacgctgctggtccacttcgacaagggctccgccgccatggcgaac
gagatcaaggcggatctggagggcagcgacgtcgccgccaaggtcgaggccatgaagcgc
gccgtcatgctcctcctcaacggcgagaccctgcccacgctcttcatcaccgtcgtccgc
tacgtcctcccctccgaggaccacaccatccagaagctgctgctcctctacctcgagatc
atcgacaagcgcgactccgccggccgcgtcctcccggagatgatcctcatctgccagaac
ctgcgcaacaacctgcagcaccccaacgagtacatccgcggcgtcacgctgcgcttcctc
tgccgcctctccgagcccgaggtgctcgagccgctcgtgccctccatcctcgagaacctc
gagcaccgacaccacttcatccgccgccacgcgctctccgcgatctccgcgatctaccgc
ctccctcacggcgaccagctcatccccgacgcccccgagctcgtcgagcgcgcgctcgcg
tccgagcaggacgcctccgcgcgccggaatgccttcctcatgctctgcctctgtgggcag
gaacgtgccgtcgcgtacctcttctccaacgccgagcgcgttaccgagtggcccgatctc
ctgcagatggcggccgtagatctcatccgcaaggtctgccgctctccaaaccgtgccgac
aagggcaggtatatcaagatcatcatctcgcttctctcatctcccagcactgctgttgtc
tacgagtgcgccggtgcgcttgtgtcgctctcctccgcgcccactgctgtgcgcgctgct
gccaacacgtactgcgagctgctcgcgtcgcagagtgacaacaatgtcaggctcatcctc
ctggaccgtctgaatgagctgcgcacgtctcaccgggacgtgatggtggatgtagtcatg
gatgtgctgcgtgcgcttgccagccccaacttggacgtcaagaggaaggtgctggatctg
gtgcttgatctgctcactcctcgtaatgttgaggaggtggtgctttacctcaagaaggag
gttgtcaaaacacagtcaggggagcttgagaagggtggcgagtaccgccagatgctcgtg
caagccatccactcatgtgctgtggagtacccagaggtggctggatccgtggtgcacctc
ctcatggacttccttggtgacactaatgttgctgcagcggttgatgttgtgctgtttgtg
cgtgagatcattgagactaaccccaagctgcgcgtctccatgatccagaggctcagtgat
accttctatcagatccgggcatcccgtgtctgttcaatcgctctctggatcctgggggag
tactccctctcgctagctgaggtcgagagcgccatttccaccatcaagcagtgccttggg
gatgtacccttcttcaccgtctcagaggaaggggagacaactgattcctccaagccagcc
cagcagatggttaactctgtcaccgtgtcctccaggcggcctgttgttcttgcagatggc
acttacgccacacagagtgctgccaccgagaccatttcaactccctcagttacccctgga
tcgttgtcatccaccctgaatctcagatcactcatcctgtcaggcgatttcttcttggct
gcggttgttgcctgcacccttaccaagctggtattgaggctggaggaggtgcagccatca
aagcttgaagcaaacaaggcttgtactggggccttgctggtcatgacctccattctgcag
ctcggattatcctcctaccttccccaaccgatcgataatgattcatatgacaggattgtg
ctttgtgtgcgattgctctgcaatactggtgatgatgtgaggaagatttggttgcagtca
tgtagacagagttttgccaagatgcttgcggagaagcaattcagggagacagaagagatg
aaggccaaggcacagatctcccatgcccagccagatgaccttattgatttctaccacctg
aagagcagaaggggcatgagccagcttgagttggaagatgaggtccaagatgatttgaag
gctgcaactggtggattcactaaggaaacagatgatgcaaacagacttaatcgcattctt
cagttgactgggttcagtgatcctgtatatgctgaagcatttgtgactgtacatcattat
gatattgtacttgatgttaccgtcattaaccgtacaaaggagacacttcagaacctgtgc
ttggaattagctacaatgggagacctcaaacttgttgaccgccctcagaactataccttg
gctcctgaatcaagcaagcaaatacgtgctaatatcaaggtttcttccacagagaccgga
gtcatatttgggaacatagtctatgaaacttccaatgtgatggaacgatcagtggttgtc
ctaaatgatattcacattgacatcatggattatatctcacctgctacatgcgcagatgtt
actttcaggaatatgtgggcagagtttgagtgggaaaacaaggttgcagttaatacggta
attcaggacgagaaggaattcttaaatcatgttatcaagtcaacaaacatgaagtgtcta
acaccaccctccgcgcttgacggggaatgcggtttcctcgctgcaaatctttacgcaaag
agtgtatttggagaagatgctttggtgaacattagcattgagaagcaagctgatggcaag
ctcagtggttacatcagaataaggagtaagacccaaggaattgcgctcagcttgggagac
aagatcaccctcaagcagaagggaagcagttaa
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