Lolium rigidum (rigid ryegrass): 124659135
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Entry
124659135 CDS
T09103
Name
(RefSeq) tRNase Z TRZ3, mitochondrial-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124659135
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
124659135
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
124659135
Prokaryotic type
124659135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
124659135
NCBI-ProteinID:
XP_047053025
LinkDB
All DBs
Position
6:complement(245129376..245141724)
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AA seq
1459 aa
AA seq
DB search
MELKNRRANPISTTSYVQILGTGMDTQDTAPSVFLFFDKQRYMFNAGEGLQRFCTEHKIK
LSKIDHIFFTRVCSETAGGLPGLVLTLAGMGDEGMSVNIWGPSELDFLAGAMKSFIPNRA
MLHTHSFGVDHSASSQPTVIIDDEVVRISAMFVKPRYNNEAKSSTDINSKPGDTAIVYSC
ELTEIKGKFDPAKAAALGLKPGPKYRELQLGNSVQSDKIDTMVHPSDVLGPSIPGPIVLL
VDCPTQYHMCELFLLQSLSQFYEDSSCQTENAKKVNCIIHLGPSSVTNTVEYQNWMKSFG
TTQHIMAGHENKNMEIPILKGSARISSRLNFVCPQLFPSSGFWPVEPSNGIEFEKNKSTS
SQACESVTAENLLKFRLRPYAQLGLDRASIPSLCSHEDIVDELISEIPEIKEVPEQISKF
WQSSVDQRSALPPDGKHMLMVEEPWINKDSCLPDVLDEQGNSSKSQDDSSLRESGWRKRP
KGNSETPCCVKNATREDLEITFLGTGSSQPSKYRNVSAIYVNLFAQGGMLLDCGEGTLGQ
LKRRFGVSGADELVKNLRCIWISHIHADHHTGLARVLALRSKLLNGVPHKPLLVIGPGPL
LRFLNAYSTLEDLDMQFLDCRRTLKASVEELLTDSATGSRTSQVDNTMFAPGSRMENYNK
KPASPRDTTALANLKEVLHESGLEILYSVPVVHCPQAFGVVLRAKEKVSSAGKAIPGWKV
VYSGDTRPCPALVDASRDATVLIHEATFEDSMKDEAIARNHSTTKEAIAVGTSAGAYRII
LTHFSQRYPKIPVFDEDDMDKTSIAFDLMSVNLADLPVLPKVLPHLKLLFKDEMVVEESD
EALRLIKYAVGKSGTDFKREMQRHSAAMRQLVHYKGLPDPLKGDALNKAVRETANEAIAA
IFSTEDPKAVVVTEGLGKRIQGFGNTNYEPSRDDKKSFLSELSEVVGIGGASIKQGLSNF
AATHSITNENGSMYKSPIRRSLTTETDRYGRYDPSEIQGESRATSGASKNASSGSWGPSP
SSSVSAGDTGSSQSGVKTREERLLETIVTASGVRLQPTRDALQIFLTEASKLDAVALSRA
LENKLNSPLWQVRMKAICVLEAVVRKQDTDPYSIVASYFSENSASVVRCCELPQVSLREK
ASKVLNLLVGEQPTGNKHLSESKTSLPTVQMPDLIDTGDHDDLGTPSSAQEISEQMMGNS
THVSSVDDLLGGEPIGNISATSNGNGSDPFADVSFHEEEIKETNDLFSGMTVEEKSSAFV
HDNSVMDGNAMPDIFGSSPEPLIQERVDDKGTVDDLMAGLNLNGTAQAQPGVKAETHSNL
SGSQFFDMNSQTSHVASAAALNGILGQSSFYQQVPMQYNMSPQMFGQSFPGQQLNYGAME
ALLAQQQQLLQNMGNFNAGLGHLSFNSMNGANAAGMPDIFNSSNQPQQHVAVMSNSKKEE
TKAFDFVSDHLAAARGSKK
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggagctcaagaaccgcagggccaaccccatcagcactacctcctacgtgcagatactc
ggtacaggaatggacactcaggatactgcgccttcagtttttttgttcttcgacaaacaa
agatatatgtttaacgctggcgagggtcttcagcgtttctgcactgaacacaagataaag
ttgtcaaagattgaccacatctttttcactcgtgtgtgctcagaaactgcagggggcctt
ccaggcttggtgctaactctggctgggatgggagatgagggcatgtcggtgaacatatgg
ggcccttcagaacttgattttctggcgggcgcaatgaaatcttttatcccaaatagggca
atgcttcacacgcacagctttggtgtggatcacagtgcatcttcacaacctactgttatt
attgatgatgaagtagttcgtatatcagcaatgtttgtcaaaccgaggtacaataacgaa
gccaagagttcgacagatatcaactcaaagcctggtgatactgctatagtctactcatgt
gaattgacagaaattaaaggaaaatttgaccctgctaaagctgctgctcttggtcttaaa
cctggaccaaagtatcgtgaacttcaacttgggaactctgtgcagtctgataaaattgat
acaatggttcatccaagtgatgttctcggcccgtcaattcctggaccaatcgtgcttcta
gtggattgccctacacaatatcacatgtgtgaactgtttttgctgcaatcgcttagccaa
ttttatgaagattcttcctgccaaacggagaatgccaagaaagtaaattgcataattcac
ttaggtccatcttctgtgacgaatacagttgaatatcagaactggatgaaatcttttggc
accacacaacatatcatggcagggcatgaaaataaaaacatggaaattcctatcttaaaa
ggtagtgcaaggatatcttcacgccttaattttgtatgccctcagctcttcccatcctct
gggttttggcctgtggaaccttcaaatggcatcgaatttgagaagaataagagtacttca
tcccaagcctgtgaaagtgtgactgcagaaaatctgctgaagtttcgtctacgtccatat
gctcaactggggttggatagagcttctattccaagcttgtgtagtcatgaagacattgta
gatgagcttatttctgagattcctgagattaaagaagttcctgaacaaattagcaagttt
tggcaaagtagtgtagaccaaagaagtgcactgccacctgatggcaagcatatgctgatg
gttgaagagccatggattaataaagactcctgtcttcctgatgttttagatgaacagggg
aattcaagcaagtctcaagatgacagtagtttgagagaaagtggctggagaaagcgccca
aagggcaattcagagaccccctgctgtgtgaagaatgcaacaagagaagatctagaaatt
acatttttgggtacgggttcatcccagccctcaaagtatcgaaatgttagtgccatatat
gttaacctgtttgcacaaggaggtatgcttcttgattgcggtgaaggaactttaggacag
ctgaaaaggaggtttggtgtaagcggtgctgatgaacttgtaaagaatttaaggtgcatc
tggatttcccatattcacgctgatcaccacaccggtcttgccagagttcttgccttgagg
tcaaaattactaaacggtgttcctcacaaacccttgctcgtgattggaccaggaccactc
ctgagattcctaaatgcatattcaacacttgaagatcttgatatgcagttcctagactgc
agacgaactttgaaggctagtgtcgaggaacttcttactgacagtgctacgggatctcgc
acaagtcaagttgacaacaccatgtttgctcctggaagcagaatggagaactacaacaag
aagcctgcaagtccgagggacactacagctctcgctaatttgaaagaggttctgcacgaa
tcaggtttggagattctgtacagtgtccccgtcgtacactgtccacaggcgtttggagtt
gtcttgagagccaaggagaaggtgagcagtgctggaaaggcgattccagggtggaaggtt
gtatattcaggtgacacgcggccctgcccggctcttgtagatgcgtccagagacgccaca
gtgctgatacacgaggccacgtttgaagacagcatgaaggatgaagcgatcgcgaggaac
cacagcacaaccaaggaggccatagcggttggcacctcggccggagcgtaccgcataatc
ctgacccacttcagccagcgataccctaaaatcccagtctttgacgaggacgacatggac
aagaccagcatcgcgtttgacctgatgagcgtaaacctcgccgatctgcccgtactgcct
aaggttctgccgcacctgaagctcctcttcaaggacgagatggtggttgaagagtctgac
gaggctttgcggttgattaaatatgcggttggaaaatctggcaccgacttcaagcgggaa
atgcaacggcattcagcagctatgcgtcagcttgttcactacaaaggactccctgacccc
ttaaaaggggatgcccttaataaggctgtccgtgaaactgcgaacgaggctattgctgct
attttctccaccgaggaccctaaagctgttgttgtgacagaaggtctaggcaagcgcata
cagggctttggaaatactaattatgagccatcgagggatgacaagaagtctttcctcagt
gaactaagtgaagtagtgggcattggtggtgcgtccatcaaacagggtttgagcaacttt
gcagccacacattcaataacaaatgagaatggtagtatgtacaagagcccaattcgtagg
tctctgaccacagaaactgatagatatggtaggtatgatccaagtgaaattcaaggagag
agccgtgccacatctggtgcttcaaagaatgcgagttctggttcttggggtccaagtcca
tcaagttcagtatcggctggtgatacgggttcaagtcaatcaggagttaagacacgcgag
gagagacttttggagacaatagttactgcaagcggtgttcggttgcaacctactcgagat
gctctgcagatatttctaacagaagcctccaaattggatgcagttgctttgagtcgtgcc
cttgagaacaaactcaattctccactgtggcaggttcgcatgaaggctatctgtgtgctg
gaagctgttgtaaggaaacaggatactgatccttattccatcgttgcttcatatttcagt
gagaacagtgcttctgttgtcagatgttgtgaactgcctcaagtttctctcagagaaaag
gcctcaaaagtattaaatcttctggttggggaacaacctaccggaaacaaacatctttca
gaatcaaaaacttcactacccactgttcagatgcccgatttgattgatacgggggatcat
gatgatcttggaactccgagttcagctcaagaaatcagtgagcagatgatggggaatagc
acacatgtttcttcagttgatgatttgcttggtggtgaacctattggcaatatcagtgcc
actagcaatggtaacggaagtgatccatttgcggatgtatcattccatgaggaagagatt
aaggagacaaatgacctattctcagggatgacagtagaggaaaaatcctcagcattcgtg
catgataactctgtgatggacggaaatgcaatgccagatatattcggcagcagccctgag
ccgttgatccaagaaagagttgatgacaaaggaactgtcgacgatttgatggctggtttg
aaccttaatggcactgcccaagctcagcctggagtaaaagcagaaactcatagtaatctc
agtggttcacagttctttgacatgaacagccagactagccatgtggcgagtgctgcagca
ctgaatggtatccttggccaaagctccttttatcagcaggttcccatgcagtacaacatg
tcaccacaaatgtttggtcaatcatttcctgggcagcaattaaattatggtgccatggaa
gctcttcttgctcagcagcaacagttactacaaaacatgggaaatttcaatgctggactt
gggcatttgtctttcaattcaatgaacggtgcaaatgcagctgggatgccagatattttc
aattcaagcaatcaacctcaacagcatgtggctgtgatgagcaattccaagaaagaagaa
actaaagcttttgactttgtctcggatcaccttgcagcagcacgtggctcgaagaagtag
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integrated database retrieval system
