Lolium rigidum (rigid ryegrass): 124659498
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Entry
124659498 CDS
T09103
Name
(RefSeq) RNA polymerase II C-terminal domain phosphatase-like 2 isoform X1
KO
K18998
RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:
3.1.3.16
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lrd01009
]
124659498
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124659498
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124659498
Protein phosphatases and associated proteins [BR:
lrd01009
]
HAD phosphatases
Fcp/Scp phosphatases
124659498
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124659498
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPOC_CPL1_2
dsrm
NIF
DSRM_2
Ribosomal_S5
Hydrolase
Phage_TAC_3
Motif
Other DBs
NCBI-GeneID:
124659498
NCBI-ProteinID:
XP_047053321
LinkDB
All DBs
Position
6:complement(76032898..76042904)
Genome browser
AA seq
733 aa
AA seq
DB search
MRMFHGDVSLGDAEVFPIKPGPDAALPFPSNEIRVSHLSPASERCPPLAILQTIAPFSVR
CKLQAKTLPLNPSIHRLYLTCFNEYKSAVVVVGDEELHLVAMPSKAVNVPCFWCCAVRAG
LYASSVGMLNLRCLAIVFDLDETLIVANTVASFERRIGDLSHKMEAVDDPGRVAAMSAEI
KRYIEDRALLKEFIDKDTVTDNGRILVAQKEEVQPIGAQDRLLRPVIRLPERNAILTRIN
PEIRDTSVFVKLRPAWEDLRSYLTAKGRKRFEVYVCTMAERDYALEIWRLLDPEANLISL
NNISERVVCVKPDSSKSLQHVFKNGGCHPKMAMVIDDRLKVWDEKDQPRVHVVPAYAPYY
APQAETANAVPVLCVARNVACNIRGGFFREFDENLLKKVFELLYENELLDLPYAPDVGDY
LVCEDTSFVPTNKDPAPIPEGMSGAEVEKRLNGRVDQKQISSSTPIPEGMSGAEVEKRLN
GRAHQVDQKQISSSTRSSDDVRVAPRGNLAGSNVESNGGSLPITPLLFVSVLQEIGRLCN
SKVEFRSTVSSTGKSTQFSVEVLFSNEKVGSGTGKTREEAQVQAAEKALQNLQSNYLSFV
APMAGVLNKDTSKSPGGGNGFLEDDIDADGDTSMKELSGSTPIVDRLSSVISLLRELCVE
DQHVIFRDEVQNPGSAINEEYHFQVELAGQILGIGIGANRDFAKLQAAEEALRFLETTTD
PQIKKHLRPIRCS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcggatgttccacggcgacgtctccctcggcgacgccgaggtcttcccgatcaagccc
gggcccgacgccgcgctgcccttccccagcaacgagatccgcgtcagccacctctcgccc
gccagcgagcgctgcccgccgctcgccatcctccagaccatcgcgcccttctccgtgcga
tgcaagctccaggccaagacgctcccgctcaaccccagcatccaccgcctctacctcaca
tgcttcaacgagtacaagagcgcggtggtggtggtcggggacgaggagctgcacctggtg
gcgatgccgagcaaggcggtcaacgtgccctgcttctggtgctgcgccgtgcgcgccggc
ctctacgcctcctccgtcgggatgctcaacctccgctgcctcgccatcgtcttcgacctc
gacgagaccctcatcgtcgcaaacaccgtcgcatccttcgagcgccgcatcggggacctc
tcacacaagatggaggccgtggacgaccccggcagggtggcggccatgtccgccgagatc
aagcgatacatcgaggacagggcgcttctaaaggagttcatcgacaaggataccgttacg
gataatggcaggatcctagtggcacagaaggaggaggtgcagcctattggtgcccaggac
cggcttctgcggcccgtcatccgcctaccggagaggaacgccattctcacccgcatcaat
ccagagatccgcgatactagtgtttttgtaaagctaaggcctgcctgggaagatttgaga
agttatctaactgccaagggacgcaagagattcgaggtctatgtatgtacgatggctgaa
agagattatgctcttgagatatggaggcttcttgatccagaagctaatttaatcagcttg
aataatatttcagaacgtgtagtatgtgtaaaaccagattctagtaagtctctgcagcat
gtttttaaaaacggaggatgccatccaaagatggccatggtgattgatgacaggctgaag
gtctgggatgagaaagaccagcctcgagtccatgttgtccctgcatatgctccatactat
gccccacaggctgagacggcgaatgctgttccagtgctttgtgttgcgagaaatgttgct
tgcaatattcgtggtggtttcttcagggagtttgacgaaaatctattgaagaaagtgttt
gaactattatacgaaaacgagttattggatcttccatacgctccagatgtcggcgactac
ttagtctgcgaggacactagttttgtaccaaccaacaaagatcctgcccctatacctgag
ggtatgagtggagctgaagtggagaagaggttgaatggacgggtggaccaaaaacagata
tcttcttcaacccctatacctgagggtatgagtggagctgaagtggagaagagattgaat
gggcgggcacatcaggtggaccaaaaacagatatcttcgtcaacccgttcatcagatgac
gtgcgagtggcaccgcgaggcaatctagctggttcaaatgtcgaatccaatggaggctca
ctgccaataacccctttattgtttgtctcggtattacaagaaattgggcgactatgtaac
tctaaggtggagtttaggtctacagtaagcagcactggcaaaagtacgcaattttcagtt
gaggttctatttagtaacgaaaaagttggatctggcactggaaaaacaagggaggaggcc
caagtgcaagctgccgaaaaggctctccaaaatttgcaaagcaattacttgtcatttgtt
gctcctatggctggggttcttaataaagacacaagcaagtctcctgggggtggaaatggc
tttctggaagacgatatcgatgcagatggtgatacttctatgaaagaactatctggaagt
acaccaattgtggataggttgtcctctgttataagtcttcttagagaactttgcgtggag
gatcagcatgtaatatttcgagatgaagtccagaatcctggctcggcaatcaacgaagaa
taccattttcaggttgaacttgcaggacagatacttgggattggcattggtgccaacaga
gattttgcgaagcttcaggctgcagaagaggccctgagattcctggaaacaactactgac
ccacagatcaagaagcatttgagaccaataagatgcagttga
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