Lolium rigidum (rigid ryegrass): 124659650
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Entry
124659650 CDS
T09103
Name
(RefSeq) sister chromatid cohesion 1 protein 4
KO
K06670
cohesin complex subunit SCC1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124659650
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124659650
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
bPH_6
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
124659650
NCBI-ProteinID:
XP_047053439
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All DBs
Position
6:complement(64140518..64149777)
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AA seq
1358 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVTDTDIGVSVDSIIFPEVPIALRLSSHLM
VGVVRIYSRKVNYLFHDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFHLDDFE
LPEAAFQGDIDHHVSAKEQITLQDNPERTAYSTSEFGLDERFGDGNSSHMGLDLEEELLL
TKDHSIQLESDDGIIIQGRSSIHLTDMDVDDNPSKDEGAEGCNNMDDEPSTHSKHITSWT
GYNVQTPDLNMLLHNEDDAGPSTSYYQPSPYPFDEPASPEFVSAQAPATPGLMEETVPSR
VHESPVLSPQRKASPSSNEETAKADNFAAPPSEFLQSEAAKADNLAAPPSEFLQSEAAKA
ANFAATPSEFLQSAAANANDAVGAETIDFGLAKPVQVESSGAVHEMDSPRQHCSTEDLLP
VPQTSNLEATVDKLVRNTDDIAVSGETLTSKATMEGVTFVQNASEPFANGSTEPSMIRNP
THFNEGSVDVQGYNMPTMGGVPFVQNTSEPCTNGSAEPRVTGNPTHFNEGSVNMQGYNTM
TSNYSIEQNSQRAPPEMARNNISVADFQQNDGPIFHQNTGPIFHQNAGPIFQQNPATMFQ
QNPATMFQQNSAGMFQQSPGTIFPPNAGTLFPQNAGTVFQQNTGTLFQQNTGTIFQQNAG
QQNAGTIFQQNASQQNTGTIFQQNAGQQNAGTIFQQNSGQQNAGTIFQQNAGQQNAGTMF
QQNAGTVFQQNAGTIPQYMAYSDRPNALSTSNFFPERETMLSAPDTQFHLTNDLGFGQVT
AEKGITESDGSNKIASLTSRKRHLEDSLPAPESRTTVNLSITPHGKRPADAVPNDDDLLA
SILVGRRTPGLRLDSTPLPPNASSLKRQRLTPKTTTPRMTPKRRVKMDDAMVIHADIIRQ
QLISTEDIRRIRRKAPCTRSEIWMIEKGSLEEDIFREPIFSCMRKDLNKLQYRTYGIVPH
PTLHNVELQGKPDMPETIAVDTDNVSISGAKESATLDHQLHMVLPDGTRLDAMPQEATAA
VDPTPQEATGAVYPTPQEATDAVDGTAAFGLQMPSDDHVNNIEKVTDSLFGDGKETPLVN
ETSFDANIPAQDDILDKDGRQDTSADLQRNTNADTPLFVLDDTTHDSATRVTDAPDVVLD
SSSPARAQAVDDLNGEQRDILHSDINVFEDKEMPTSEITGLEFAQNASAFPQPTEDENAV
SAMGENSGLQENNAGSFVDMDNMGHDFALKECSDFGSAIHDVDTDFLNYDDDGDFDEAAI
DDEPNPDEFQSLDALSGWSSRTRGVARYLKTLFDEDSGLGRKNVAIDHLLRGKTRKEASR
MFFETLVLSTKDYIQVEQPNPFDFVNVKPGPKLLKTDF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgttctactcgcagttcatcttggccaagaagggccccctcgggaccatatggatcgcc
gcccacttggagcgcaagctgcgcaagaaccaggtcaccgataccgacatcggcgtctca
gtagattcaattatattccccgaggttccaattgcgctgcggttatccagccatcttatg
gtaggcgtggtcagaatctattctcggaaggtcaactacctgttccatgattgcagtgaa
gctttgctcaagataaaacaagcctttaggtccactgctgttgatctcccccctgaagaa
tcaactgctccataccattctataacactccctgagacatttcatcttgatgattttgaa
ttgccggaggctgcatttcagggcgacattgatcatcatgtaagcgcaaaagaacagatc
accttgcaagacaacccagagagaacagcatattcaacatccgaatttggtttagatgaa
agatttggtgatggcaattcttcacatatgggtttagatttggaggaggaattactgctg
acgaaggatcactcaattcaactcgagtctgatgatggtatcatcattcaaggccggtca
tcaattcatcttactgatatggatgttgacgataacccaagtaaagatgaaggggctgaa
ggatgcaacaacatggatgatgaaccttctactcacagcaagcatattactagctggact
ggttacaatgtacagacccctgatttgaatatgctattgcataatgaagatgatgcaggg
ccatcaacgtcatactatcaacctagtccctacccttttgatgaacctgcgtcacctgag
tttgtaagcgctcaagccccagccacacctggattaatggaagaaacagttccttccaga
gtgcatgaaagtcctgtactgagccctcaacgaaaagcttcaccatcaagcaatgaggaa
actgcaaaggctgacaattttgctgctccaccctcagaatttctccagtcagaggctgca
aaggctgacaatttggctgctccaccctcagaatttctccagtcagaggctgcaaaggct
gccaattttgctgctacaccctcagaatttcttcagtcagctgcagcaaatgctaatgat
gctgttggtgctgagacgattgattttggattggccaagcctgtgcaagttgaatcttct
ggtgctgtgcatgagatggattctccgaggcaacactgttcaaccgaggatttgctgcca
gtaccacaaacctcaaacctggaggctaccgtggataagttggtgcgaaataccgatgat
atagctgtatcaggtgaaacactaacttctaaagcaaccatggaaggcgttacctttgtt
caaaatgcctcagagccatttgctaatggttctactgagccatccatgataaggaatcca
acacatttcaatgagggatcagtggacgtgcaagggtataacatgccaaccatgggaggc
gtgccctttgttcaaaatacttcagagccatgcactaatggttctgctgagccacgcgtg
accggtaatccaacacattttaacgagggatcagtaaacatgcaaggatataacacgatg
acttctaattattcaatagaacagaactcacaaagagcaccaccagaaatggcacgcaat
aatatatcagttgcagatttccaacagaacgatggaccaatattccaccagaacactgga
cccatattccatcagaacgctggaccgatattccaacagaaccctgcgacaatgttccaa
cagaaccctgcgacaatgttccaacagaactccgcgggaatgttccaacaaagccctgga
acaatattcccaccgaacgcaggaacactattcccacagaatgctggaacagttttccaa
cagaatactggaacacttttccaacagaacactggaacaattttccagcagaatgctggc
caacagaacgctggaacaattttccagcagaatgctagccaacagaacactggaacaatt
ttccaacagaatgctggccaacagaacgctggaacaattttccagcagaattctggccaa
cagaatgctggaacaattttccagcagaatgctggccaacagaatgctggaacaatgttc
caacagaatgctggaacggttttccaacagaacgctggaacaataccacaatacatggca
tatagtgatagaccaaatgccttgtcgacctcaaatttcttcccagaacgtgaaacaatg
ttgtcagctccagatactcagttccacttgacaaatgacttggggttcgggcaggttact
gcagagaaaggaatcactgaatctgatggaagtaacaaaatagctagccttaccagcaga
aaacgtcacttggaggacagcttgccagctccagagagtaggactactgtaaatctgtct
atcacaccacatggtaaaagacctgctgatgcagttcctaacgatgatgatttactggca
tccattttagttggtagaagaacccctggattgaggcttgattcaacaccattgccgcca
aatgcatcatctttgaaacgccaaaggttaacaccaaagaccacgacaccaaggatgaca
cccaagagaagagtgaaaatggatgatgccatggtcatacatgctgatattatacggcag
cagttgattagtactgaggatataaggcgtatccgcagaaaggctccatgtactcgttct
gaaatatggatgattgagaaaggttcactagaggaggatatattccgcgagcctatattt
tcctgtatgcgcaaagatctgaacaagttgcagtatcggacctatggcattgttcctcac
cctaccttacataacgttgaactacaagggaaaccagacatgcctgaaactattgcagta
gataccgataatgttagcatttctggtgcaaaggaaagtgcaactcttgaccaccaactt
cacatggtgctaccggatggaactcgattagatgctatgccgcaagaagcaactgctgca
gttgatcctacgccgcaagaagcaactggtgcagtttatcctacaccgcaagaagcaact
gatgcagttgatggtacagctgcatttggtttgcaaatgccatctgacgatcatgttaac
aacattgaaaaagtaaccgactccttgtttggtgatgggaaagaaactccacttgttaat
gaaacaagttttgatgcaaacatccctgctcaagatgatatactggataaggatggtcgt
caagatacttcagcagatttgcagaggaatacaaatgctgatacacctctctttgtgcta
gatgacaccacccatgattctgcaactagggtaacagatgctccagatgttgttttggat
agttctagcccagctcgtgcacaagcggtggacgatctgaacggggaacagagggacatc
cttcacagtgatattaatgtttttgaggataaggagatgcccacttctgagattactgga
ctggaattcgctcagaatgcctctgcttttcctcaaccaacagaggatgagaatgctgtg
tctgccatgggagaaaattctggcttgcaagaaaacaacgcaggatcctttgtggacatg
gacaacatgggccatgactttgcactcaaggaatgcagtgattttggcagtgcaattcat
gatgtcgacacagattttctcaattatgatgatgatggagactttgatgaggcagcaatt
gatgacgagccaaatcctgatgagttccagtctcttgatgcacttagtggttggtcttct
cgtaccaggggtgttgcgagatatctcaagactttgtttgatgaagactctggtctgggg
agaaagaatgttgccattgatcatctattaagaggaaagactcggaaagaagcatcaagg
atgttcttcgagaccttggtcctgtcaacgaaggactatattcaagtggagcaaccgaac
cctttcgactttgtcaacgtcaagccaggaccgaagctcctgaagacagatttctag
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