KEGG   Lolium rigidum (rigid ryegrass): 124659760
Entry
124659760         CDS       T09103                                 
Name
(RefSeq) uncharacterized protein LOC124659760
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    124659760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lrd04121]
    124659760
Enzymes [BR:lrd01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124659760
Ubiquitin system [BR:lrd04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124659760
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-RING_2 RING_XB3-XBAT31 Prok-RING_4 zf-ANAPC11 zf-C3HC4_4 zf-rbx1 Rtf2
Other DBs
NCBI-GeneID: 124659760
NCBI-ProteinID: XP_047053533
LinkDB
Position
6:complement(100385904..100388348)
AA seq 544 aa
MDADEAAGSSRRMDLNLYLGLPLAPRPRRSDLGSDLALSTPMPSSPSSSAASVDAPPPPG
PPYSPSRVDLSPPPPEAYSSFHLEEPHLQYVPPPPAPVIHGPQDDHGFGFHPPPPLVRAS
ELLGWEDRPSSSTASSSFLPDVATRYRRLLEQTGSRWLRTRRFRSDLPPLGSEAQPSAYD
TAVPVAPHHEPANDTVGDNKVAGSGAEAGASEEPEERGKSTATFECNICFEMAGEPVVTS
CGHLFCWPCLYQWLNVYSNHKECPVCKGEVTEANITPIYGRGNSSSDAEKAVEEGKQPGP
AIPPRPHGNRLESFRQQFQHLRPMSRRLGDAHGILSSWRRLLDQQIMSSVSRFEGPPEPA
ANEAGDIAQHTSRLSRLANRMRARRLQGELDNPPDAGSIAPDSGLLGNNAPDAPRQHLPE
GIDLLQRLTLIGIANTERLATAMNDLRRIAAPSQYGASASSSNPLNPEAPLERTHVGAVP
STDQASNSSTIAVIQGDTAISETAGEPSNAGSSRTLRRRGRSNALASLDVDGGPPQRNKR
RRMN
NT seq 1635 nt   +upstreamnt  +downstreamnt
atggacgccgatgaggctgcgggaagtagcaggaggatggatctgaacctatacctcggc
ctcccgctcgccccgcgcccgcgccgctccgacctcggctccgacctcgccctcagcacc
ccgatgccctcttcgccctcctcctccgccgcctccgtcgacgctcctccgccgccgggg
cccccgtactccccgtcccgtgttgacctttctcctccaccaccggaggcatactcctcg
ttccatctcgaggaaccgcacctacagtacgtgccgccgcctccggcgccggtcatccac
ggcccccaggacgaccacggattcggcttccatcccccgccgccgctggtgcgagccagc
gaactgctgggctgggaggaccgcccgtcttcatcgacggcctcctcctccttcctacct
gacgttgccacaaggtacaggcggctgctcgagcagacagggagccgatggctccgcaca
aggcggtttagatcggaccttccgccgctaggctctgaggctcagccttcagcctatgac
acagcagtgccggtggcgccgcatcacgagccagcgaatgatactgttggggacaataag
gtagccggcagtggagctgaagcaggtgcctccgaggagccggaggagcggggcaagagc
actgccacatttgagtgcaacatatgcttcgagatggccggagagccggtggtcacctct
tgtggccatctcttctgctggccttgcttgtaccaatggcttaatgtttactccaaccac
aaggagtgcccagtctgcaaaggcgaggtgacggaggcgaacatcactcctatctatggg
agagggaattccagttcagatgcagagaaggctgtggaagaaggtaagcagccaggtcct
gcaatcccaccaaggccacatggaaatcggcttgagagttttaggcagcagtttcagcac
ttgcgtccgatgtcaagaaggctcggtgacgcccatgggatactgtcatcatggaggcgc
cttctcgatcagcagattatgagtagtgtgagtagatttgaaggcccacctgaaccagct
gcgaatgaagcaggcgatattgctcaacacacgagtcgcctaagtagattggccaacagg
atgagagcaagacggttgcagggtgagttggataaccctcctgatgctggctccattgcc
cccgatagtggtttgcttggaaataatgcaccagatgcacccagacagcatttaccagaa
ggaattgatttgctgcaacgacttactcttattggcattgcaaatacagaaaggttggct
actgctatgaatgacctgagaagaatagctgcacctagtcaatacggagcatctgcttcg
tcatcaaaccctttgaatcctgaggcaccacttgagagaactcatgttggtgcagtaccc
tctacagaccaagcatctaattcgagcaccattgcagtgatacagggggacacagctatt
tctgagacagcgggagagcctagtaatgcagggtcttccagaaccctcaggagaaggggg
agaagcaatgccttggcctctttagatgtggatggtggtcctccacagcgcaacaagagg
cggagaatgaactga

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