Lolium rigidum (rigid ryegrass): 124659817
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Entry
124659817 CDS
T09103
Name
(RefSeq) AMSH-like ubiquitin thioesterase 3
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124659817
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124659817
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124659817
04121 Ubiquitin system [BR:
lrd04121
]
124659817
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124659817
Peptidases and inhibitors [BR:
lrd01002
]
Metallo peptidases
Family M67
124659817
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Others
Others
124659817
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
124659817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
USP8_dimer
Prok-JAB
Motif
Other DBs
NCBI-GeneID:
124659817
NCBI-ProteinID:
XP_047053577
LinkDB
All DBs
Position
6:complement(203990112..203997468)
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AA seq
516 aa
AA seq
DB search
MGPPQPAKGIISIEACARPIAVDHRISLPYYFRIAGTLLRQAKIYRDEKNILDLYVILLR
YTSLLCETIPKHRDYPVFKSREAEFVRNANSSTLIDVVNELESLKPVVKQQIFEHNRRGT
PEADGLNGTHSANHRTEKHPPTTYSTQPFVGSNNRSLQKFSPDGRHNMAALPSAQTDRQI
RKQFSNLPLPKEETLARHSIFGPNGLHGQWTGPVAAIKVQYPSNLEFTQSDMTSLVPAML
NQDGLHGPSVTYPDSTRKDDDDMKSVLSLDDGRWSAPTEECTSAPSVSLEGELSQLNIRQ
PSPPPVLAEVHPERRPISPSRVADPTPGLAVSETGRYQNLHVPVKLMECFLRVAEANTKR
SLETCGVLAGTLKKRTFYVTTLIIPKQKSTSDSCEATNEEELFEVQDNGSLFTLGWIHTH
PTQSCFLSSIDLHNHYSYQVMLPEAIAIVMAPTDTRKKHGIFHLTDPGGIGVIHDCPERG
FHPHKAPLDGSPIYEHCSHVYMNADTKFNMIDLRER
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggggccaccgcagccagccaagggcatcatcagcatagaggcctgcgctcggccgatc
gctgtcgaccaccgcatcagcctcccttactacttccgcatcgcgggcaccctcctccga
caggctaagatttatcgagatgagaagaatatccttgacctgtatgtcatcctcctgaga
tacacgagcttgctgtgtgagacaatccccaagcaccgcgattaccccgtattcaagtcg
agggaagcagagtttgtcaggaatgctaactcctctacactcatcgatgttgtcaatgag
cttgagtctctgaagccagttgtgaagcagcagatctttgagcataatagaagaggtaca
ccagaagctgatggtctgaatggaacccactctgcaaatcatagaacagagaagcatcca
ccgactacatattccacacagccatttgtaggaagcaataacagatcattacaaaaattc
tccccagatgggagacataatatggcagcattaccgagtgcccaaactgataggcagatc
cgcaagcaattttcaaatctgcctcttccaaaagaagaaacactggcaagacactcgata
tttggacctaatgggcttcatggacaatggactgggcctgttgctgcaatcaaggtccag
tatccaagcaatcttgagtttacacaaagtgacatgacaagtctagtgccagctatgttg
aaccaagatggtctgcatggtcccagtgtcacatatcctgatagcactagaaaggatgat
gatgatatgaaatctgtgctatctcttgatgatggtcgatggtctgcacccacagaagaa
tgcacctcagcgccttctgttagtctggagggagaattgtcccaattgaatatcagacag
ccttcacccccacctgtcctggcggaggtacatcctgagcgtagaccaatttctccatca
agagttgctgatccaacacccgggcttgctgtatcagaaaccggtcgttatcagaatttg
catgtgccagtgaagttgatggagtgttttctaagggttgctgaggcaaacactaaaaga
agtttagaaacatgtggggttcttgctggtaccctgaaaaagagaactttttatgtgaca
accttaataatcccaaagcagaaatctacatctgattcgtgtgaagctacaaatgaagaa
gaactatttgaagttcaggacaatggctcacttttcactcttggttggattcatacacat
ccaacacagtcctgttttctgtcttccattgatctccacaatcattattcgtatcaggtc
atgctacctgaggcaattgcaatagttatggcacctaccgacacaagaaaaaaacatggt
atatttcatctaacggatccgggtggtatcggtgtgattcatgattgcccggagagggga
ttccatccacataaggcgcctctagatggctcaccaatctacgagcactgctcccatgtg
tacatgaatgctgatacaaagtttaatatgattgacctccgagaacggtga
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