Lolium rigidum (rigid ryegrass): 124660135
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Entry
124660135 CDS
T09103
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like
KO
K14948
polypyrimidine tract-binding protein 2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lrd03041
]
124660135
Spliceosome [BR:
lrd03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124660135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
124660135
NCBI-ProteinID:
XP_047053879
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All DBs
Position
6:126058688..126065033
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AA seq
533 aa
AA seq
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MASGGNPQFRYTQPPSKVIHVRNLPWECTDEELAELGSPFGKVVNTKCNVGANRNQAFIE
FADQNQAIAMVSYYASSAEPAQVRGKNVYLQYSNRQEIVNSKNTGDAAGNVLLVTMEGVL
PDAVSIDVLHLVFSAFGYVHKIATFEKASGYQALIQFSDAETASSAKDALDGRCIPSYLL
PELDGACTLRINYSAHSVLNVKFQSHRSRDYTNPYLPLAPSAIDGSGVAQDGKNQEPESN
VLLATVENMQYIVTIDALHEVFSAYGFVQKVAIFEKNAGFHALIQYPDIQTAVKAKEALE
GHSIYEGGFCKLHLAFSRHTDLNVRINNERGRDYTGGNSAPANHGPSILGPQPAGTTAPP
AATGTVVPPGPASILATPGAPSPQSFHPSSEPHPQTASGGSQQYANQGILQGPPGAPPQI
PGFGVPGFPQGSNQAQMSQHSGQGNQQMPNHQLPQAMLFPGHGRQQLPPGPQMMQGPGFG
GLQIPQGPMQPMPQFHLYSNQQFPPGAGPQMMGFPGQGGQYPPFGRRLHPYNR
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggcttccggcgggaacccgcagttccggtacacccagccgccgtcgaaggtgatacac
gtcaggaacctgccgtgggagtgcaccgacgaggagctggccgagctgggcagccccttc
ggcaaggtcgtcaacaccaagtgcaacgtcggcgccaaccgcaaccaggccttcatcgaa
ttcgctgaccaaaatcaggcaattgctatggtatcttattacgcatcgtctgcggagcca
gcacaggtaagaggcaaaaatgtgtacctccagtactccaatagacaggagattgtcaac
agcaagaacacgggggacgctgcaggaaatgttttgctggtgaccatggagggtgttctg
ccagatgctgtgagcatcgatgttctgcacttggtattttctgcttttggatatgttcac
aagattgctacctttgagaaggcatctggttatcaggcattgatacagttctctgatgct
gagacagcatcgtctgcaaaagatgctcttgatggcagatgcattcctagctacttgctt
ccagaacttgatggggcctgcactttgagaataaattattcagcacattctgttctaaat
gtcaaatttcagagccacaggagtagggactatacaaacccataccttcctcttgctcct
tctgctattgatggatctggagtggcccaggatgggaagaatcaggagccagagagcaat
gttcttcttgcaacagttgagaatatgcagtatattgttacaatagatgcccttcacgag
gtcttttctgcttatgggtttgtgcaaaaggttgctatttttgagaaaaacgcaggcttc
catgcattaatccaatatccagatattcaaactgcagttaaagcaaaagaggcattagaa
ggacacagcatctatgaaggcggattttgcaagcttcacctggcgttttcacgccatact
gatcttaatgttaggatcaacaatgagcgaggtcgcgattacactggaggtaacagtgct
ccagctaaccacggaccttccattcttggtcctcagccagctggcactacagctcctcct
gcagccactggtacagtagtgccaccagggcctgcttctattctggcaacacctggagca
ccatccccacaatcgtttcatccttccagtgagccacacccacaaactgcttcaggtgga
tctcaacagtacgccaaccagggaatcctacaaggcccccctggtgctcctccacagatc
cccggctttggagtcccaggctttccccaaggctcaaatcaagctcaaatgtcacagcat
tcaggtcaaggaaatcaacagatgcccaaccaccagctacctcaagcaatgttgttccct
ggccatggaaggcagcagctacctccaggtcctcaaatgatgcagggtccaggtttcgga
ggcctgcagattccacaaggtcctatgcaaccaatgccgcagtttcatctatacagcaac
cagcagtttcctcctggtgcagggccgcagatgatgggctttcctgggcagggaggtcag
tatcctccatttggtaggcggcttcatccctataaccgttag
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integrated database retrieval system
