Lolium rigidum (rigid ryegrass): 124660141
Help
Entry
124660141 CDS
T09103
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124660141
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
90S particles
Other 90S particles
124660141
Pre-60S particles
Other pre-60S particles
124660141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
RRP12_HEAT
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
124660141
NCBI-ProteinID:
XP_047053887
LinkDB
All DBs
Position
6:3211343..3224941
Genome browser
AA seq
1755 aa
AA seq
DB search
MKRKQRTSAAAAAATEVDADEPSQALLPLDDYSGDVCAALTARYGRSASAQHRHLLATAA
AIGSILADDGHSLTAESYLPAVVSALRAAGPSDPAAASALASLLVILIPHISSLPPASAS
ESASSLADFLASPDASKLPTGTVRSVVKSLGHLALLLDAAADWAAVAAPLEALLAASVDQ
RAKVRRCAQESVEKLFAYLERSGCGKKASSAAVGLFEKHISSVRGLAKLDADASEAKETE
AVHMLGAMAVLVPHLSKKARSTVFSGARRLLTARFSPLTRHVLRLMEALLEHLKVENVEP
ELENFISLLLAYLPYDEKKPDDTIIAALQLMRSCLAKLAGHSKLWTKALPSAFEAVSGYL
ILDRKCSEDIAKLLIECIYSHVDQSILLTNESQPDAGDSSDGAAVKSICLSINKRLKKCP
APPLPDNVLKIVLALFLKLGECSYIFMKDILLTLSRLGTKIHKEPHLKKVEECIGAAIVA
MGPDKIHSLLPISFHEDWFTCSNTWLVPILNKYVYGASLQHFLEYIVPLAKSLRDASSRA
KKPRKCKELQAWSDQLWNLLPAFCRYPSDVYQNFGSLSKLLVEMLKCDRCLYKSACKGLQ
QLIDGTRRLTSSDQDVEIPAEISALFTSSEANNLSCVSLQRCSKKDARKSMKVLASHSVD
LLCTFADDFLDSSEKRAHIKDALRSLAQLSGSANICNLFLSLVKRFGLEDTPLEPENLEC
QTNEVDGKEEESSDATAEINNKRSLLMELIPTLAEAADEDALDLFFGFIKSSLLNNIKSC
DSRALFALSIILKEHHGYSLTQLDEIMMLLHGIKPDSNNAVLEGQLVCYKYLLVHMIKVN
EESTSKKAFLILNELILALKSKKENRRIAYDVLLAISTSLRSSESNNGDSDLQRLFTMVM
GYLSSPSPHIVSGAIAALSLLIYNDANFCMEVPNLIPSVLVLLQNKAIEIIKASLGFVKV
LVTSLHPEKLLSLQADIMTGILPWSSFTKHHFKGKVVLILEILIRKCGFDAVNLVTPEKY
KEFVREVEEGRKGNHNPADGAEPEANDPEHPTPKRRKWGDSNAEPGQEETPKKEFFVKGD
RKPHFGGARNHNDKASGGKGDRTHFRPKSNARSGNSQNYRGGKSQGHDTRPRNGVFKRTP
NRGTGQSAHSPRFKKARTAATNCSSLLYLKFGITVIFSNWLERKKIYGLMSVTDNFIHSD
IEGLMWPFRPIYLLLSCLSKPRCQIPTQPAGSRRIFSTSYLLCRLRRPAMAVAGPGQLNL
DEFPSWGSRGVDCFEKLEQIGEGTYGQVYMAREMETNEIVALKKIRMDNEREGFPITAIR
EIKILKKLHHQNVIQLKEIVTSPGPERDEQGKPIDGNKYKGSIYMVFEYMDHDLTGLADR
PGMRFTVPQIKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGNLKLADFGLARSFSS
DHNGNLTNRVITLWYRPPELLLGSTRYGPAVDMWSVGCIFAELLNGKPILPGKNEPEQLT
KIFELCGTPDEANWPGVTKMPWYNNFKPPRQLKRKVKEAFKHFDRHALDLLEKMLTLDPS
QRMAAKEALDAEYFWTDPLPCDPKSLPSYEASHEFQTKKKRQQQRQAEEAAKRQKLQHPP
PHTRLPPIQHPGQSHQIRPSQHNAPPVAAGPSHHYAKPRGPGGPNRYPQGGSGYNNQNRG
SQGSGYGSGPYAQQGRGGPPPFPAAGGRGAAGSGYGAGGGPNFPQGGPPYGASGPGRGQN
YPQGGSRNQGYGSWQ
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggaagcagagaacctcggcggccgccgccgccgccaccgaagtcgacgccgac
gagccgtcccaggccctgctccccctcgacgactattcgggcgacgtctgcgccgccctc
accgcgcgctacggccgctccgcctccgcgcagcaccgccacctgctcgccaccgccgcc
gccatcggctccatcctcgcggacgacgggcactccctcacagccgagtcctacctcccc
gccgtcgtctccgcgctccgagccgccggcccctctgacccggccgccgcgtccgcgctc
gcctccctcctcgtcatcctcatcccccacatctcctccctgccgccggcctccgcctct
gagtccgcctcctcgctcgccgacttcctcgcctcccctgacgcctccaagctccccacc
ggcaccgtgcgctcggtggtcaagtcgctcggccacttggccctccttctcgacgccgca
gccgattgggccgctgtggccgcgcctcttgaggctctcctcgccgcgtccgtggaccag
cgggccaaggtccgaagatgcgcacaggagagcgtcgagaagctctttgcttacctggag
cgttccggttgcgggaagaaagctagcagtgctgcagttggtttgtttgagaaacacatt
tcatcggtgagaggccttgccaaattggatgcagacgcttccgaggctaaggagacggag
gcggttcacatgctaggtgcgatggcggttttagttccgcatctatctaagaaggcaagg
agtacggtgttctcgggtgctcgtcggctgttgaccgcccgttttagcccgctcacaagg
catgtcctcaggctaatggaggccttgctggagcatcttaaggttgagaatgtcgagccg
gagttggagaatttcatctccttgctgttggcctatctgccttatgatgagaagaagcct
gatgataccatcatcgcagcattacagctcatgagaagttgtttagcgaaattggctggc
cactcaaaattgtggacaaaggctcttccatctgcatttgaggcagtttcaggataccta
attctggacagaaaatgttctgaagatatagcaaaactgctaatagagtgcatctattct
catgtcgaccaaagtattctgttgactaatgaatcacagcctgatgctggggattcaagt
gatggcgctgctgtcaaatcaatctgtttgtctatcaataaaagactcaaaaagtgtcct
gctcctcctcttcctgataatgtgttaaagatcgtcctggctttgtttctcaaactgggg
gagtgttcttacatttttatgaaagacatcctactaactttgtcacgacttggtacgaaa
atacacaaagaaccacacctgaagaaggttgaggagtgcattggggcagcaatagttgcc
atggggccagataaaattcattcactactcccaatatcttttcacgaggattggtttaca
tgctcaaatacttggctcgtacccattttaaacaagtatgtttatggggcctcactgcaa
cactttttagagtacattgtaccgctagcgaaatctttacgggatgcttcaagcagggca
aaaaaaccacgaaaatgtaaagagttgcaagcttggagtgatcaattgtggaacttgctt
cctgccttctgccgctatccgtctgatgtatatcagaattttggttccttgtccaaactg
ctggtagagatgctgaagtgtgatcggtgtctctacaaatccgcttgtaaaggccttcag
caacttatcgatggaactagaagattaactagcagtgatcaagacgtagaaatccctgca
gaaatttcagccttgttcacgtcatcggaggctaataacttaagctgtgtaagcttacaa
agatgctcgaaaaaagatgcccgtaaaagcatgaaagtcctggcatcacattctgtggat
cttctttgcacttttgcagatgatttccttgactcttcagaaaagcgtgctcacataaag
gatgctctgagatcccttgctcaactttctggtagcgcaaatatctgtaacctttttctt
tcactagttaaaagatttggtttggaagatactccattggagccagagaatctagaatgt
caaacaaatgaggtagatggaaaagaagaagagagtagtgatgctacagcggagataaac
aataagaggtcacttctgatggaactcattcccacgctagctgaagctgctgatgaagat
gcgcttgatttattttttggattcatcaagtcttctttactgaacaacatcaagtcgtgt
gacagcagagctctcttcgcattaagcataattttgaaggaacatcatggatattcttta
acccagttggatgaaataatgatgcttcttcatggaataaagccagattctaataatgca
gttttagaaggccaattagtatgctacaagtatctgttggttcatatgattaaggttaat
gaagagagcaccagcaagaaggcattcttgattctaaatgagttaatacttgcattgaag
tctaagaaggaaaatagaagaatagcatacgatgtactcctggctatcagtactagcttg
aggagctccgaatcaaataacggagattcagatcttcaacgactattcacaatggtaatg
ggatatctttctagtccgtctcctcacatagtgagtggagcaattgctgcgctatcattg
cttatatacaatgatgctaatttttgcatggaagttccaaatttgataccatcagttcta
gttctgctgcaaaataaagctattgaaataattaaggcatctttgggcttcgttaaggtg
ttggtaacatctttgcatccagaaaaactattgagtttgcaagcagatatcatgactggc
atattaccatggtcatcttttacaaagcaccatttcaaagggaaggttgtactaatactg
gaaatattgattaggaaatgtggatttgatgccgttaacctagtaacaccggaaaaatac
aaggagttcgttagagaggttgaagagggccgcaaggggaatcataatccagcagatggt
gcagagcctgaggcaaatgatcctgagcatcctactccgaagagaagaaaatggggtgac
tctaatgctgagcctgggcaagaggaaacaccgaaaaaggaattcttcgtcaaaggggat
aggaaacctcactttggaggtgccagaaaccataacgacaaagcatcaggcggcaaaggt
gatagaactcatttcagacccaaatccaatgcacggtcaggaaatagtcaaaattacaga
ggcggtaaatctcaaggccacgacacgaggcccagaaatggtgtgttcaagaggacaccg
aaccgcgggacgggacagtcggcccactctcctagattcaagaaggctaggactgcagca
acaaactgctcaagccttttgtatctgaaatttggaatcacggtgatattttcgaactgg
ttggaaagaaaaaaaatatacggtttgatgtcagtcacggataactttatccactcggac
atagaagggctcatgtggcccttccggcccatataccttctcttgtcttgtctctccaag
ccgcggtgtcagattccgacccaacccgccggcagccgccgcatcttctccacctcgtat
cttctctgtcgactccggcggccggccatggcggtggcggggccggggcagctgaacctg
gacgagttcccctcgtggggctcccgcggcgtcgactgcttcgagaagctcgagcagatc
ggcgagggcacctacgggcaagtttacatggcgagggagatggagaccaacgagatcgtc
gccctcaagaagatccgcatggacaacgagcgcgaaggcttcccgatcacggcgatacgg
gagatcaagatcctcaagaagctccaccaccagaacgttatccagctcaaggagatcgtc
acctccccaggcccggagcgagacgagcaaggaaagccaatcgatggcaacaagtacaag
gggagcatctacatggtgttcgagtacatggaccacgacctcaccgggctcgccgacagg
ccggggatgcgcttcaccgtgccgcagatcaagtgctacatgaagcagctgcttacgggc
ctgcactattgccatgtcaaccaggtgctgcatcgagatatcaaagggtctaacctattg
atagacaacgagggtaacctgaagctcgctgattttgggctggcgagatcattctcgagt
gatcacaatggaaacctgactaaccgtgtgatcaccttgtggtatagacccccggagttg
ctactcggaagcacgaggtacggtccagctgtcgacatgtggtctgtgggttgtattttt
gctgagctcctcaatggaaagccaatactgccaggaaagaatgagccggagcagctaact
aaaatctttgagctttgtggcacgcctgatgaggcaaactggcctggcgtcactaaaatg
ccatggtacaacaatttcaagcctccccggcagttgaagagaaaagttaaagaagccttt
aaacattttgaccggcatgctctggaccttttagagaagatgttaactctagatccatca
cagaggatggcagcaaaagaagcactcgatgcagagtatttctggactgatccattaccg
tgtgatccaaaaagtttgccatcatatgaagcatcacacgagttccagaccaagaaaaaa
cgtcagcagcagaggcaagcagaggaagctgcaaagcgccaaaaactgcagcaccctcct
ccacacactcgcttgcctccgatccagcatccaggccaatcacaccagatcaggcccagc
cagcacaatgcacctcccgtggcagctggcccgagccatcactatgcaaaaccccgagga
ccaggggggcctaacaggtacccgcagggtggctcaggctataataatcagaaccgtgga
agccagggcagtggctatgggagcggcccgtatgctcagcaaggacgaggaggacctcct
ccgttccctgcagcaggtggccgtggtgcggctggcagcggctatggagctggtggtggg
ccaaatttcccgcaaggcggtccgccatatggcgcgtctggtccgggccgaggtcagaac
tatcctcagggtggttctcgcaatcagggttatgggagctggcaatag
DBGET
integrated database retrieval system