Lolium rigidum (rigid ryegrass): 124660527
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Entry
124660527 CDS
T09103
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124660527
Membrane trafficking [BR:
lrd04131
]
Protein recycling
Others
EARP complex
124660527
Endosome - Golgi transport
Tethering complex
GARP complex
124660527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
COG7
Vps54_N
RINT1_TIP1
COG4_N
MPH2
Motif
Other DBs
NCBI-GeneID:
124660527
NCBI-ProteinID:
XP_047054303
LinkDB
All DBs
Position
6:50260291..50268178
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AA seq
836 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIQSEIRRVDASILAAVRQQSNSGTKAKEELA
AATNAVQELMYKIREIKTKAGQSETMVQEICRDIKKLDCAKRHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKITELREKLKNIKKILKSHVYSD
FTSLGTGKEAEDANLLQQLSDACLVVDALEPSVREELVKNFCSKELISYKQIFEGAELAK
LDKTERRYAWIKRRLRSNEDTWKIFPPSWHVDYLLCIQFCKITRTQLVDILNNLKEKPDV
ATLLLALQRTLEFEEELAEKFSGGTTTARNKEQESDDENEGVEQNKIVSDIRKKYEKKVG
VPNDEVQQDKDKQKDLSVPGAGFNFHGIISSCFEPYMAVYIELEEKSLVEQLDKLIQEEK
WETEEGSQTHILSSSMQVFLVIRRSLKRCSALTKNQTLFNLFQVFQRILKAYATKLYARI
PKAGTGIVAAATGTDGQIRTSDRDEKMICYIVNTAEYCHQTSGELAENVAKMISSQFSDK
VDMSDVEDEFSAVITKALMTLVHGVETKFDAEMVAMTRVPWSTLESVGDQSEYVNGISTI
LSSTVPVLGSLLSPTYFQYFLDKLAASLGPRFYLNIYKCRHISETGAQQMLLDTQAVKTI
LLDIPALGKQTTVAASYSKFVSREMSKAEALLKVILSPVDSVANTYRALLPEGTPLEFQR
ILELKGLKKADQQAILEDFNKHSPSIKHPTITPTVAPPVAIASVPIVPVATQAVSATASP
SMSTALTGALANREDVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccagcgccctcgagtacatcaaccagatgttccccaccgaggcgtcgctg
tcgggggtggagccgctgatgcagaagatacagagcgagattcgccgggtggacgccagc
atcctcgccgccgtccgccagcagagcaactcgggaaccaaggccaaggaagaacttgct
gctgccacaaatgctgttcaggagctaatgtataagatacgggagataaaaactaaggct
ggacaaagtgaaacaatggttcaagaaatctgccgtgacataaaaaagctggattgcgca
aagaggcatataacaactacaataactgctcttcaccggcttactatgcttgtttctgct
gttgagcaacttcaggtcatggcctcaaaacgtcagtacaaggaagcagctgcacaacta
gaggcagtaaaccagttgtgcagtcattttgaagcctatcgggatgtgccaaaaataaca
gagctcagagagaaactcaagaatatcaagaaaatcctcaaatcccatgtatattcagat
tttacaagcttaggaactgggaaggaagcagaagatgccaatctattgcagcagctatct
gatgcttgcttggtggttgatgctctggaaccgtctgtgagagaagagctagtaaagaat
ttttgcagcaaggagctcatctcatataagcagatctttgaaggggcagaactggcaaag
ttggacaagactgaaaggagatatgcatggattaagcgtcgattacgatcaaatgaggat
acctggaaaatatttccaccctcctggcatgttgattatctgttgtgtatccagttctgt
aagattacaaggacccagcttgtcgatatcctgaataatctcaaagaaaagccagatgtt
gcaacattgttattggcgttgcagagaactcttgaatttgaggaagaacttgctgagaaa
ttcagtggaggaactacaactgctcggaataaagagcaggaaagcgatgatgaaaatgag
ggtgtggaacaaaataaaattgtttcagatatacggaagaaatacgagaagaaagtggga
gtgcccaatgatgaagttcaacaagacaaagacaagcagaaagacttatcagttcctggt
gctgggttcaactttcatggaattatatcatcttgttttgagccatacatggctgtgtac
atagaactcgaggagaaatctttggttgaacaattagataaacttatccaggaagaaaaa
tgggaaaccgaggaagggagtcagacacacattctatcaagcagcatgcaggtgttcttg
gtaattaggagaagcttaaagagatgcagtgcattaacaaagaaccaaacattattcaac
ttgtttcaggtatttcaaagaatacttaaggcctatgcaacaaagttatatgctaggata
ccaaaagctggtactggcattgttgcagctgctactggtaccgatggtcagatcaggacc
tctgacagggatgagaaaatgatatgttacattgttaacacggcggaatattgtcaccaa
acctctggtgagctagctgagaatgttgctaagatgatcagttctcagttttctgacaag
gtggacatgtctgacgttgaggatgaattctcagctgtgatcacaaaagctttgatgaca
cttgtgcatggtgtagaaaccaaatttgatgctgaaatggttgcaatgactcgtgttcct
tggtcaacccttgaaagcgtcggcgatcaatcagagtatgtgaatggtatcagcacaatt
ttgtccagtactgttcctgtgcttggtagcctgctttcaccaacctacttccagtatttc
ctggacaaactggctgcctcgcttggtccacggttttatctcaatatatacaagtgtagg
catatatcggaaacgggtgcacagcagatgcttttggacactcaagcggtcaagactatt
ctattggacatcccagctctggggaaacagactacagttgcggctagctactcaaagttt
gtaagccgggaaatgagtaaagctgaagcactcctgaaggttattttgtcaccagttgat
tctgttgctaatacctaccgtgctctccttccggaaggcacacctcttgagtttcagcgg
atacttgagctcaagggcttgaagaaagcagaccaacaagctatactggaagacttcaac
aagcatagccccagcatcaaacaccctaccataactcccacagtcgcaccgccagttgcc
atcgcatctgtcccaatcgtaccagtcgcgactcaagccgtttcagcgacagcatcgcca
agcatgtccaccgccttgacgggggctctggccaaccgagaggatgtactcgcccgagct
gcagcactcggacggggcgctgccacgacagggttcaagaggttcctcgcattgacagag
gcagccaaagaccggaaggacgggccgttccgtaagcttttcaacgcctaa
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