KEGG   Lolium rigidum (rigid ryegrass): 124660673
Entry
124660673         CDS       T09103                                 
Name
(RefSeq) protein RAE1-like
  KO
K14298  mRNA export factor
Organism
lrd  Lolium rigidum (rigid ryegrass)
Pathway
lrd03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lrd00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124660673
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lrd03019]
    124660673
   03036 Chromosome and associated proteins [BR:lrd03036]
    124660673
Messenger RNA biogenesis [BR:lrd03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     124660673
Chromosome and associated proteins [BR:lrd03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    124660673
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_DCAF12 Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st NBCH_WD40
Other DBs
NCBI-GeneID: 124660673
NCBI-ProteinID: XP_047054451
LinkDB
Position
6:156093984..156099438
AA seq 345 aa
MASFNAAGAGAANPNPNKSLEVNPAPGDAVSSLSFSPKANHLIATSWDNQVRCWEVQPGG
QCQAKASISHDQPVLCSAWNGDGTTVFSGGCDKVVKMWPLLSGGQPTALSGHEAPIKELA
WIQPMGLLVSGSWDKTLRYWDLRQAQPAHVQQLPERCYALSLSYPLLAVGTADRNVIIFN
LQNPQAEFKRIQSPLKYQTRCLAAFPDQSGFLVGSIEGRVGVHHVDDANQSKNFTFKCHR
EGNDIYSVNSLNFHPVHHTFATAGSDGGFNFWDKDSKQRLKAFSKCPSPITCSTFNQDGS
IFAYAVCYDWSKGAEKHTPSTAKTNIFLHSVQESDVKGKPRAGKK
NT seq 1038 nt   +upstreamnt  +downstreamnt
atggcgagcttcaacgccgccggcgccggagcagccaaccccaaccccaacaaatccctc
gaggtgaatccggccccgggggacgcggtctccagcctcagcttcagccccaaggccaac
cacctcatcgccacctcctgggacaaccaggttcggtgctgggaggtccagccgggcggc
caatgccaggcgaaggcctcgatctcgcacgaccagccggttctctgctcggcgtggaac
ggtgatgggactacggttttctcgggagggtgtgacaaggtggtcaagatgtggccgctg
ctgtctggcgggcagcccacggccttgtcggggcatgaggcgcccatcaaggagctcgcc
tggattcaacccatggggctccttgtcagtgggagctgggataagactttgaggtactgg
gacctgcgacaagctcagccagcacatgttcagcaacttcctgagcgctgctatgctctc
tcgcttagttatcctctgctggctgttggcactgctgaccgcaacgtcattatcttcaac
ctgcagaatccacaggctgaattcaagaggatccagtcacctttgaaataccagacaagg
tgtcttgctgcattccctgaccaatcagggttcttggttggatcaatagagggacgtgtt
ggtgttcatcatgtggatgacgctaatcagagcaaaaattttacattcaaatgtcaccgc
gagggcaatgatatatactctgttaactcactgaactttcatcctgtgcaccatacattt
gctactgcgggctctgatggaggtttcaacttttgggacaaggacagtaaacaaagactg
aaggcttttagcaagtgcccatcacccatcacatgcagcacattcaatcaggatgggtca
atctttgcttatgcggtatgctatgattggagcaagggtgccgagaagcatactccttct
actgcaaagacaaatatctttctgcatagtgtgcaggaatctgatgtcaaaggaaagccc
cgtgctggaaagaagtag

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