Lolium rigidum (rigid ryegrass): 124660673
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Entry
124660673 CDS
T09103
Name
(RefSeq) protein RAE1-like
KO
K14298
mRNA export factor
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124660673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124660673
03036 Chromosome and associated proteins [BR:
lrd03036
]
124660673
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124660673
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124660673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF12
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
124660673
NCBI-ProteinID:
XP_047054451
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Position
6:156093984..156099438
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AA seq
345 aa
AA seq
DB search
MASFNAAGAGAANPNPNKSLEVNPAPGDAVSSLSFSPKANHLIATSWDNQVRCWEVQPGG
QCQAKASISHDQPVLCSAWNGDGTTVFSGGCDKVVKMWPLLSGGQPTALSGHEAPIKELA
WIQPMGLLVSGSWDKTLRYWDLRQAQPAHVQQLPERCYALSLSYPLLAVGTADRNVIIFN
LQNPQAEFKRIQSPLKYQTRCLAAFPDQSGFLVGSIEGRVGVHHVDDANQSKNFTFKCHR
EGNDIYSVNSLNFHPVHHTFATAGSDGGFNFWDKDSKQRLKAFSKCPSPITCSTFNQDGS
IFAYAVCYDWSKGAEKHTPSTAKTNIFLHSVQESDVKGKPRAGKK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttcaacgccgccggcgccggagcagccaaccccaaccccaacaaatccctc
gaggtgaatccggccccgggggacgcggtctccagcctcagcttcagccccaaggccaac
cacctcatcgccacctcctgggacaaccaggttcggtgctgggaggtccagccgggcggc
caatgccaggcgaaggcctcgatctcgcacgaccagccggttctctgctcggcgtggaac
ggtgatgggactacggttttctcgggagggtgtgacaaggtggtcaagatgtggccgctg
ctgtctggcgggcagcccacggccttgtcggggcatgaggcgcccatcaaggagctcgcc
tggattcaacccatggggctccttgtcagtgggagctgggataagactttgaggtactgg
gacctgcgacaagctcagccagcacatgttcagcaacttcctgagcgctgctatgctctc
tcgcttagttatcctctgctggctgttggcactgctgaccgcaacgtcattatcttcaac
ctgcagaatccacaggctgaattcaagaggatccagtcacctttgaaataccagacaagg
tgtcttgctgcattccctgaccaatcagggttcttggttggatcaatagagggacgtgtt
ggtgttcatcatgtggatgacgctaatcagagcaaaaattttacattcaaatgtcaccgc
gagggcaatgatatatactctgttaactcactgaactttcatcctgtgcaccatacattt
gctactgcgggctctgatggaggtttcaacttttgggacaaggacagtaaacaaagactg
aaggcttttagcaagtgcccatcacccatcacatgcagcacattcaatcaggatgggtca
atctttgcttatgcggtatgctatgattggagcaagggtgccgagaagcatactccttct
actgcaaagacaaatatctttctgcatagtgtgcaggaatctgatgtcaaaggaaagccc
cgtgctggaaagaagtag
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