Lolium rigidum (rigid ryegrass): 124660696
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Entry
124660696 CDS
T09103
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
124660696
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
124660696
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Endotoxin_C
Motif
Other DBs
NCBI-GeneID:
124660696
NCBI-ProteinID:
XP_047054495
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Position
1:complement(115114772..115118869)
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AA seq
655 aa
AA seq
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MAKLRSLVACCMGPPRAAVDAMDGVKLKVTNRYVLIKNDIFELTLSNPDGMVTGVRYNGV
DNLMEILNKEDNRGYWDIVWNPPGERTGIFDVIKGTDFRIIYHDENQAEVSFTRSWDPSL
EGKAVPLIIDKRFIVLRGSSGFYTYGIYEHKEGWPDFGIGETRVAFKLRNDKFHYMAMAD
NRQRIMPMPDDRLPPRGRQLAYPEAVLLVDPINPKLKGEVDDKYQYSCEDQYNNVHGWIS
SDPPIGFWQITPSDEFRTGGPLKQNLTSHVGPTMLAMFLSAHYAGDDLSPKFTNGEYWKK
VHGPVFMYLNSSQDASDPSLLWEDAKVQMMMEKESWPYDFALSEDFQKTEQRGCISGRLL
VRDRYIIDGEDLYATSAYVGLALPGEAGSWQRECKGYQFWCRADEDGSFYIKNIVAGNYN
LYAWVPGFIGDYKFDATLTISSGDDIYLGDLVYEPPRDGPTMWEIGIPDRSAAEFYVPDP
NPNYVNRLFINHPDRFRQYGLWERYAELYPDRDLVYTIGESDYSTDWFYAQVTRRTDQNT
YQPTTWQIRFNLDSVSPNSNYKFRVALASSANAELQVRFNDQDRVVPHFTTGLIGRDNAI
ARHGIHGLYWLFNIAVSSAWLVRGMNTIYLKQPRNQSPFQGIMYDYLRLEGPCGC
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcttaggagtctcgtggcttgctgcatgggccctccacgggcagccgtcgac
gccatggacggtgtcaagcttaaggtcaccaacagatacgttctgattaaaaatgacatc
ttcgagctgacgctctccaaccccgacggtatggtgaccggcgtgcgctacaatggtgtg
gataatctcatggagattcttaacaaagaagacaacagagggtactgggacattgtttgg
aatccaccgggagagcgaactggaatatttgacgtgatcaaaggtacagacttccgcatc
atatatcatgatgaaaaccaggctgaggtctccttcaccagatcatgggatccttccctc
gaaggaaaagctgttccgttgatcatcgataaaaggttcatcgtgcttcgtggctcctca
ggattctacacctatggaatctatgaacacaaggaagggtggcctgattttggcattggg
gagaccagagtggccttcaagcttcggaacgacaagttccattacatggcaatggctgac
aacaggcagagaataatgccgatgcctgatgaccgtttgcctccccgtggccggcaatta
gcgtaccctgaggctgtcctccttgtggatccaattaatcctaaactcaaaggggaggtc
gatgacaagtaccaatactcgtgtgaagaccaatacaataatgtccatggatggatatca
tctgatcctccgattggcttctggcaaatcacgccgagcgacgagttccgtactggagga
cctctgaagcagaacttgacatctcatgtgggccccactatgctcgcgatgtttcttagc
gcccattatgccggggatgacctttcgcctaagttcaccaatggggaatattggaaaaag
gttcatggaccggtgttcatgtacctgaactccagtcaggacgcatctgacccaagtcta
ctgtgggaggacgcaaaagttcagatgatgatggagaaagagagctggccatatgatttt
gcactttcagaggatttccagaagactgagcaaagaggctgtatctctggtagattgctt
gtaagagacaggtatattatcgatggtgaggatctttatgccacatcagcctatgtaggc
ttagcactaccaggagaagctggatcgtggcaaagagagtgcaagggataccaattctgg
tgtagagcagatgaagatggtagcttctacataaagaacattgtagctggaaactacaat
ctttatgcatgggttccaggtttcataggggactacaaattcgatgccacactaacaata
tcttcaggggatgatatttatctgggtgaccttgtgtacgagccgccaagagacggtccg
actatgtgggagatcggaatacctgatcgatctgctgcggagttctatgtcccagacccg
aaccccaactatgtcaacagattgttcatcaatcatcctgacagattcaggcagtatggg
ctttgggaaagatatgcagaactgtatccagaccgtgatttggtatacacaatcggcgaa
agcgactacagcaccgattggttctacgctcaagttaccagaagaactgatcagaacaca
taccagcccaccacatggcaaataaggttcaatcttgacagcgtctctccgaacagcaat
tacaaattcagggtggcgcttgcgtcttcggctaacgctgagctacaggtccgtttcaac
gatcaggacagggttgttccccacttcaccactgggctcatcgggcgtgacaacgccatc
gcgaggcatgggatccatggcctgtactggctgttcaacatcgctgtgagtagtgcctgg
cttgtccgagggatgaacacgatatacctgaagcagcccaggaaccagagtccctttcag
gggatcatgtatgactacctgcgcctggaaggaccctgtggctgctaa
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