Lolium rigidum (rigid ryegrass): 124660862
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Entry
124660862 CDS
T09103
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lrd03021
]
124660862
Transcription machinery [BR:
lrd03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
124660862
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
CCDC39
CTK3
CC_Bre1
RNF6_N
TEX13
ADIP
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
124660862
NCBI-ProteinID:
XP_047054653
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All DBs
Position
6:42391519..42402145
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AA seq
474 aa
AA seq
DB search
MSTGFSSEIFAQKLVKLNISQQSIETLSHWCVFHHRCCQQVVETWDRDFHSAPQERKISL
LYLANDIMQNSKKDGMRYIHEFFKVIAAALDDLFTNGDDFGRNVVQRLVNIWDDRKLFGT
QGQLLKEEYTRKFKELKSKKPGGELMEKVISSYKHMLRAPIDEDKLMRKCNSALSFVDNL
NKEYGNSYLGSSDGSSFVEELQEQHSTLRNTIDQFRTAESLRATLVSHLKEALHEQEFKM
ELVRHQLRAAQARYKKADDLCQKLGIDVARQEPSKGLENSSFSEVPVTSFPVSANGDSFE
KRQSTAVMYSREGDGGEYETLNGVFSSGATRDSIDQKIEEHSPGNKKQKLENGGSFPHPQ
APPPPPPFPYPDFEQPPPPPQYPPSPESSPPPLPPSMPPPIPPPPPTTDVFMPVPAAPMG
GMPYSVFPPFPPPVNYPMINMPPPFPGAPNPPHLGFPGFGGPFYGPPFPSAPHQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaggattcagctcagagatctttgcgcagaagcttgtgaagctcaatatttca
caacagagtatagagactttatcacactggtgtgtctttcatcatcggtgctgccagcaa
gttgttgaaacatgggatagagattttcactctgctcctcaagagaggaagatatctttg
ctatatcttgcaaatgatattatgcagaatagtaagaaggacggcatgagatatatacat
gaatttttcaaggtcattgctgctgccttagatgacttgttcaccaacggagatgatttt
ggacggaatgtcgtacaaagactggttaacatttgggatgatcgcaagttgtttggcacc
caaggacaacttctgaaggaagaatacacgcggaaatttaaggagctgaaatcaaaaaaa
cctggtggggagctaatggagaaggtcatatcgagctacaagcatatgctgcgtgcacct
atagatgaggacaagttaatgagaaaatgcaacagtgctctaagctttgttgacaacctc
aacaaagagtatggaaactcgtacttagggagcagtgatggatctagctttgtggaggag
ctgcaggaacaacatagtaccttgagaaacaccattgaccaattcagaacggctgaatca
ctcagggccactctggtttctcatttgaaggaagcactccatgagcaggagttcaaaatg
gaactagtcagacaccaacttcgggcagctcaggcccgatacaaaaaagctgatgacctc
tgccagaagcttggaatagatgtagcaaggcaggaaccatctaaaggacttgagaactcc
agtttctctgaagtgcctgttacttctttcccagtttcagctaatggtgattcttttgag
aagagacaatcgactgcagtgatgtattcacgggaaggagatggaggtgagtatgagacc
ctcaacggtgttttttcttcaggagccaccagggacagtattgaccagaaaatagaagag
cactctcctggtaataagaagcagaagctagagaacggtggatcttttcctcaccctcaa
gcaccaccaccgccgcccccattcccgtatcctgattttgaacagccaccaccaccacct
cagtatcctccatcaccagagtctagcccaccgccacttccgccttcaatgccaccccca
atcccaccaccaccacctacaactgatgtatttatgccagttcctgctgctccaatggga
ggaatgccgtacagcgttttcccaccatttcctccgcctgtaaactatcccatgatcaac
atgccaccgcctttccctggtgctccaaaccctcctcatctgggtttccctggattcggg
ggtccgttctatggcccgcctttcccgtcggcaccccaccaatga
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