Lolium rigidum (rigid ryegrass): 124660928
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Entry
124660928 CDS
T09103
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124660928
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lrd02000
]
124660928
04147 Exosome [BR:
lrd04147
]
124660928
04090 CD molecules [BR:
lrd04090
]
124660928
Enzymes [BR:
lrd01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
124660928
Transporters [BR:
lrd02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
124660928
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124660928
CD molecules [BR:
lrd04090
]
Proteins
124660928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_29
RsgA_GTPase
Zeta_toxin
AAA_16
AAA_30
AAA_15
AAA_24
DUF87
AAA_23
AAA_21
YobI-ATPase
DLIC
Motif
Other DBs
NCBI-GeneID:
124660928
NCBI-ProteinID:
XP_047054733
LinkDB
All DBs
Position
6:complement(67966659..67973133)
Genome browser
AA seq
1268 aa
AA seq
DB search
MDATAAADSSGEGVRHGGGERGKDGRPEKDEAKKKVPLLGMFRYADRIDVLLMVVGTLGA
MGNGVAEPLMSVLFGNVINSFGESSSSDVLRRVTKVVLNFIYLGIGTAVASFLQVSCWTM
AGERQSARIRSFYLQSVLRQDIAFFDTEMTTGEAVSRMSSDTVIVQDALGEKAGKLLQLA
SAFFGGFIIAFTRGWLLTLVMLTSLPLVAIAAAVSGQMLTRVSNKRLTSYSDAADTVEQT
IGSIRTVVSFNGEKKAIAMYNNFIKKAYKTVIEEGLINGFGMGSVFCILFSSYGLAFWYG
GKLIIDKGYTGGKIITVLFSVVAGVTSLGNATPSTSAVAEGQSAAYRLFETIERKPEINS
DDTSGMVLQNIKGDVELKDVYFRYPARPGQLILDGLSLQVASGTTMAIVGESGSGKSTVI
SLVERFYDPQAGEVLIDGTNIKNLSLDWIRGKIGLVSQEPVLFMTSIKENIIYGKEDATL
EEIKRAAELANAANFIDKLPNGYDTLVGQRGTLLSGGQKQRIAIARAILKDPKILLLDEA
TSALDVESERIVQEALNRIMVERTTLVVAHRLSTVRNVDCITVVRQGKIVEQGPHHELVK
DPIGAYSQLIRLQETRGDEKRKIQDSGNSLSKSTSLSIRRSMTKDSFGNSNRYSFKNPLG
LSFELHEDEITENHRKDDLLDGKTLKNAPIGRLFNLNKPEVPFLLLGSIAASVHGIIFPL
FGIIMSSILKSFYEPPDKLRKDSSFWALICVVLGIASLISIPAEYFLFGIAGGKLIERVR
TLSFQNIVRQEVAWFDNPTNSSGALGTRLSVDALNVRRLVGDNLAVIVQSAAALITGFVI
AFTADWRLALVITCVIPLVGAQGYAQVKYLKGFSEEAKEMYEDASQVATDAVGSIRTVAS
FCAEKRVVTTYNKKCEALRKQGIRSGIVGGLGFGLTFLVLYLTYALCFYVGAQFVRQGKT
TFADVFRVFFALVLAAVGVSQASALASNATKARDSAISIFSILDRKSKIDTISDEGLMLE
NVTGDIDFTNVSFKYPSRPDVQIFSDFTLHIPSRKTIALVGESGSGKSTIIALLERFYDS
DSGRISIDGVEIKSLRISWLRDQMGLVGQEPVLFNDTIRANITYGKHGEVTEEEVTAVAK
AANAHDFISSLPQGYDTLVGEKGVQLSGGQKQRVAIARAIIKDPKILLLDEATSALDAES
ERIVQDALDRVMVSRTTIVVAHRLSTIKGADMIAVLKEGKIAEKGKHEALMRIKGGVYAS
LVELRSNS
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgacagcagcagcagatagtagtggagaaggagtacgccacggcggcggcgag
cgaggaaaagatggccggccggagaaggacgaggccaagaagaaggtaccgttgctcggc
atgttcaggtacgccgaccgcatcgacgtgctgctgatggtggtcggcacgctgggcgcg
atgggcaacggcgtggcggagccactcatgtccgtgctctttgggaacgtcatcaactcc
tttggcgagagcagcagcagcgacgtcctccgccgtgtgaccaaggttgtgctgaacttc
atatatctgggcattgggacagcagttgcttcgtttcttcaggtgtcttgctggacgatg
gcaggagaaaggcaatcggcccgcatccgttctttttacctgcaatcagttctgagacaa
gatattgcattcttcgacacagaaatgacaactggagaagcagtttctagaatgtctagc
gatacagtcatagttcaagatgctcttggtgagaaggcagggaagcttttacaactcgca
tccgccttctttggtggttttatcatagcattcacaagaggctggctcctgactcttgtc
atgctaacatcgttaccactagtcgcgatcgctgctgcagtgtctggacagatgctaacc
cgagtttctaacaaaagactaacatcgtatagtgatgctgcagacacggttgaacagaca
attggatctatacgaacagttgtgtccttcaacggtgagaagaaagctatagcaatgtac
aataatttcataaaaaaggcttacaagacagttattgaggaaggtcttatcaacggtttt
ggaatggggtctgtcttttgcatcttatttagcagctatggcctagccttctggtatggt
ggaaagctaatcattgacaaaggttatactggagggaagatcatcactgttttgttttct
gtagtggctggcgtaacttcattagggaatgcaacaccatcaacttctgcagttgcagaa
ggtcaatctgcagcatacagactgttcgaaacaattgagagaaaaccagagataaattca
gatgatactagtggtatggttttacaaaatatcaagggggatgttgagctaaaggatgtg
tactttcgctaccctgcaagacctgggcagttaatattagatggattgtcattacaagta
gccagtggaacaacaatggccatagttggagagagtggaagtggtaagtcaacagttatc
agcctagttgaaagattctatgatccacaagctggtgaagttttgatagatggaaccaac
atcaagaatttgagtcttgattggataagagggaagatcggtcttgttagccaagaacca
gtgctttttatgacctccattaaagagaacataatctatggtaaagaagatgcgaccctt
gaagagattaagagagcagccgagcttgcaaatgcagcaaacttcattgacaagctacca
aatggctatgatacattggttggccagcgtggcactctgctttctggaggacaaaaacaa
agaattgcaattgcgagggctatccttaaagatccaaaaattcttttgctagatgaagca
acaagtgcattggatgtggaatctgagaggatagttcaggaggcactcaataggataatg
gtagaaagaaccacactcgtcgttgctcatcgtttgagcactgtaaggaatgtggactgc
atcacagttgttcgtcaagggaaaatagttgaacaaggtcctcatcatgaattggtgaag
gatcccattggagcttactcccagcttattaggctacaagaaactcgtggtgatgaaaag
cgtaaaatacaagattctggaaattccttatcaaagagcactagtttgtcaatcagacgg
tcaatgactaaagattcatttggcaatagcaacagatactccttcaagaatccattagga
ttgtcatttgagttgcatgaggatgaaatcacggaaaaccacaggaaagacgaccttctc
gatgggaagacccttaagaatgcaccaattggacgtctttttaatcttaacaagccagag
gtgccatttcttctgctcggttctatagcagcatcggtgcatggaatcattttcccatta
tttggcattataatgtccagcattttaaaatcattttacgagccaccagacaagctgcga
aaagattctagcttttgggcactgatatgtgttgttctggggattgcatctttgatttcc
atcccagcagaatattttttgtttggaattgctggtggtaagcttatagagcgtgttcgt
actctgtcatttcaaaatattgtgcgccaagaagttgcttggtttgataatcccacaaat
tccagtggggcacttggtacgcggctctcagttgatgcattaaatgtccggcgcttagta
ggagataacctagctgttatagtgcagtctgcagctgcactaatcactggctttgtcata
gcgtttacagcggactggagacttgcactggttatcacttgtgtcatccctttagtgggt
gcacagggttatgctcaagtgaagtacttgaaagggtttagcgaagaagctaaggagatg
tatgaagatgcaagtcaagttgcaactgatgctgttggtagtatcaggactgtagcatct
ttctgtgcggagaaaagagtggttacaacatataacaagaaatgtgaagctttaaggaaa
cagggaattcgaagtggaatcgttggagggcttggttttggtttaacattcttggtgttg
tatcttacatatgctctatgtttctatgtcggtgctcagtttgtacgtcagggaaaaact
acctttgcagatgttttcagagttttctttgctttagttttggcagctgttggggtttcc
caggcaagtgcattggcatctaatgcaacaaaggcaagggattccgccatttctattttc
agtattctagatcggaagtccaaaatcgatacaattagcgatgagggtttgatgttggaa
aatgtcaccggcgatatcgatttcaccaatgtcagtttcaagtacccatcacgccctgat
gtccaaatattcagtgacttcacgttgcacattccttccagaaagaccatagcactcgtt
ggggagagcggtagtggcaagtccacaataattgctttactggagcgtttctatgattct
gattctggtagaatctcaatagatggagtcgaaattaagagcttaagaataagctggtta
agggatcagatggggctggtaggccaggagccagtgcttttcaacgacacgatccgtgcc
aacataacatatgggaaacacggagaggtgacagaggaagaagtcacggctgtggccaag
gcagccaatgctcatgacttcatatcaagcttgccacaaggatacgataccctggtcggc
gagaaaggagtgcaactatctggtgggcagaaacagcgggtagccatcgcaagggccatc
ataaaggaccctaagatactactacttgatgaggcaaccagtgccctcgatgcggaatcg
gagcgcattgttcaagatgcactggatcgggtcatggtcagcaggaccaccatagtggtg
gcgcaccgcctctccacaattaaaggggctgatatgattgcagtcctcaaggaaggcaag
attgcagaaaagggaaagcatgaggccctcatgcgaatcaagggtggagtctatgcttcg
ctagtagaacttcgctcaaattcttag
DBGET
integrated database retrieval system
