Lolium rigidum (rigid ryegrass): 124660982
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Entry
124660982 CDS
T09103
Name
(RefSeq) DNA damage-binding protein 2-like
KO
K10140
DNA damage-binding protein 2
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03420
Nucleotide excision repair
lrd04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124660982
09124 Replication and repair
03420 Nucleotide excision repair
124660982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124660982
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124660982
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124660982
DNA repair and recombination proteins [BR:
lrd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
124660982
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
124660982
NCBI-ProteinID:
XP_047054794
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Position
6:290225807..290229745
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AA seq
577 aa
AA seq
DB search
MPPTMATRARFVYTRRRADDEDEDEQQQEISSSSSEDDQEEEEEEEAEASDEEGVAEEEV
AEEPAARKPPAAAAAAGRGGRKGPITISLKKVCKVCKKTGHEAGFKGAVYIDCPMKPCFL
CKMPGHTTLTCPHRVAMEHGVIPAPRRNTNTSLDYVFQSQVKGKISMVKPRFLVPNQLEC
GNIKFHQRRVTCLEFHPTKNNVLLSGDKKGLLGIWDYVKLHEKITYDSVHSCILNTMKLD
TANDAVLYTASSDGTIRSTDLDTGMGSPLLNLNPDGWNGPSTWRMIYGMDLNAEKGLLLV
ADSFGFLYLLDRRSKERIGQPILIHKKGSKVTGLHCNPAQPEVLLSSGNDHFARIWDTRK
LEPKSALASLAHGRVVNSGYFSPRSGSKILTTCQDNRIRVWDYIFGDLESPSREIVHSHD
FNRHLTPFKAEWDPKDYSETVAVIGRYISENHNGVALHPIDFIDTSTGKLLAEVMDPDIT
TISPVNKLHPQDDILATGSSRSIFIWKPKNDSDDPTEERTSQKVKEYVYSSGSQKKANGK
RGDSSDDDSDGGSDGKNKKAKKTRFTHTAKGKGKSKA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgccccccacaatggcgacccgcgcccgcttcgtctacacgcgccgccgtgcggacgac
gaggacgaggacgagcagcagcaggagatctcatcatcttcctctgaggacgaccaagag
gaagaagaggaggaggaggccgaggcttccgatgaggagggggttgctgaggaggaggtc
gccgaagagccagcggccaggaaacccccggcggcggctgcggctgcggggaggggcggg
aggaagggcccgattaccatcagcctcaagaaagtgtgcaaggtgtgcaagaagacgggg
cacgaggcggggttcaagggcgccgtgtacatcgactgccccatgaagccctgcttcctc
tgcaagatgccagggcatacgaccttgacctgcccacacagggtagcaatggaacatggt
gtcatcccagctcctaggaggaacacaaacacttcactggactatgtcttccagagccaa
gtgaaaggcaaaatttccatggtcaagccacggtttctggtacccaatcaattggagtgc
ggtaacataaaattccaccagagacgcgtgacctgcttggagtttcatccaaccaagaac
aatgtgcttttatcaggagacaagaaagggctactaggcatttgggattatgttaagttg
catgagaagatcacctatgattccgtgcattcctgtattctgaacactatgaagttggac
accgccaatgatgcagtgctatacacagcctcctctgatgggactatccgtagcacagac
ttagacacgggaatgggctctccattgttaaatcttaacccagatggttggaatggtcca
agcacttggcgcatgatatatggaatggacttaaacgccgagaaaggccttcttttggtg
gcagatagttttgggtttctttatttactggatagacggtcaaaggaaagaattgggcaa
ccaattcttatacataaaaagggtagcaaggtaactggcctccattgcaaccctgctcaa
cctgaagttcttctaagcagcggaaatgatcactttgcccgtatttgggatacaaggaaa
cttgagccaaagtctgctcttgccagccttgctcatggacgggttgtcaattcaggatat
ttttctccgcgaagtgggagcaagatcttgacgacatgccaggacaaccgaattcgtgtc
tgggattatatttttggcgatctagaatccccgagtagagaaatcgtgcacagccatgat
ttcaaccgtcacttgactcccttcaaagccgagtgggatccaaaggattattcagaaact
gttgcagttatcggtcgttacataagtgaaaaccacaacggggttgctctgcatcccatt
gatttcatagacaccagcactgggaagcttctggctgaggtgatggatcccgacataacg
actatcagcccagtgaacaagctacacccccaagacgatatcctggccacaggaagttca
aggtccatcttcatctggaaacctaagaacgattctgatgatcctacagaagaaaggacc
agccaaaaggtcaaggaatatgtgtacagctcaggttcgcagaagaaagcaaatggcaag
cgcggcgatagcagcgatgacgactcggatggcggttctgatggaaagaacaagaaagca
aagaagactcgattcacccataccgcgaagggaaagggcaaatccaaagcttga
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