Lolium rigidum (rigid ryegrass): 124661003
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Entry
124661003 CDS
T09103
Name
(RefSeq) nuclear pore complex protein NUP85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124661003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124661003
03036 Chromosome and associated proteins [BR:
lrd03036
]
124661003
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124661003
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124661003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
DUF5696
Motif
Other DBs
NCBI-GeneID:
124661003
NCBI-ProteinID:
XP_047054818
LinkDB
All DBs
Position
6:151396119..151403791
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AA seq
729 aa
AA seq
DB search
MPGMLADSGGAIVPFSGDPNHAAPPPPPPVRPIRHGVAPPISRVFVSWSSGNLLQVACLR
PPGPVDAGAEEVAGSVVEVNLAVANGSAGVEEQEIDEAEMRRIEYGSVPAFALLQSRKNA
LADAAAMQHMHSVSEHAEWWQYVLQYSKTIGKLLGSPDSLPGLMIEDPRAILKVRERPTS
LKAAWELLEIFYVDKNLHSWLPERLVDWLADYDSLLTKTDGTVYCKLSDFQKKLINLQVV
ENDPDYWNGLSAALSVGWLDVVVNMLRFHGSYQLDQMDNRETENGLVEAVAVLVSTMPRM
RPDLPTGKLGQCCTSRPDFIKAWEKWRGQVSKLECSAFWIQCGHQKTRDGLKNLLHIMMG
NIKDLTAATSHWLELFASHFLYIRPFTVGFEGMHHLAQKCIQLKPSFGNSGLTGLLNGIL
SENPEVVLAECTKKFGPWMVTHSMELLAADNEYADIMLHEERPNFGGLSIEELHRLVYAQ
VLSSHSLTWQIAPTYLSSCLNQGLGLLEILLLKQPIQDNRQVLKTLELCRLYELENVSTN
IMKIAGIYHWKHGRKGTGVYWFQQAHDKVRLDRIAQQLFERIGKSVADDNFKQWEGLLEL
LGSDIGSAGGLEFLHRYRDFKRSLQQALEGRTGEAARQTVEFLIQLMRNPSTPQRFWLPL
LHDSVRLLNCKPCPLLNVAETTLLLNKLQELSMAKLRPDFCTNHLPSHALSSVRLALASN
LARAILEEP
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgccgggcatgctggccgacagcggcggcgccatcgtcccgttctcaggggacccaaac
cacgcggcgccgccgccgccaccacccgtgcggcccatccgccacggcgtggcgccgccc
atctcccgcgtcttcgtctcctggtcaagcggcaacctcctgcaggtcgcctgcctccgg
ccgccgggtccggtggacgccggcgcggaggaggtcgccgggagcgtggtggaggtgaac
ctcgccgttgccaatggcagcgcgggggtcgaggagcaggagatcgacgaggcagagatg
cggcggatagagtacggctcggtaccggcctttgcgctgctgcagagcaggaagaacgcc
ctcgcggacgctgctgctatgcagcacatgcactcggtctcagagcacgcggaatggtgg
caatatgtgctccaatacagcaaaaccatcggtaaactccttgggagcccagatagtctt
cccggtctcatgattgaagatccaagggctattcttaaggttagggagaggcctactagt
ttaaaggctgcgtgggaactgttggagatcttctatgttgataaaaacttacacagctgg
cttcctgagcggcttgttgattggttagccgattacgacagcctcttgaccaagacggat
ggcaccgtgtattgcaagctcagtgatttccagaaaaagctcatcaacctgcaggtcgtt
gaaaatgatcctgattactggaatggattatcagcagcactttcagttgggtggcttgac
gttgtggtgaatatgctacgttttcatggatcataccaattggatcagatggacaaccgt
gagacagaaaacgggttggttgaggctgttgcagttcttgtctcaaccatgccgcgcatg
agaccagatttgccaacgggtaaattaggccagtgctgtacatcaagacctgattttatc
aaggcatgggaaaaatggcgaggtcaagtaagtaaactggagtgcagtgcattttggatt
cagtgcggtcatcaaaaaactcgtgatgggttgaagaatctgcttcacatcatgatggga
aacataaaggacctcactgctgctacttcccattggctagagctattcgcttctcatttt
ctttatataaggccatttacggtgggttttgaagggatgcatcacttagcacagaaatgc
atacagcttaagccatctttcggcaatagtggattaacaggtctccttaacggcatcctt
tcagaaaatccagaggtagtcttggcggaatgcacaaaaaaatttgggccttggatggta
acacactccatggagctgttggcagctgataatgaatatgcagatattatgttgcatgaa
gagcgacctaactttggtggcttaagcatagaggaattgcaccggctagtctacgctcaa
gttttgagttctcattctttaacttggcagattgcaccgacttacctgtcctcgtgtcta
aaccaaggcctagggctcttggagattctacttcttaagcaacccatacaagacaaccgt
caagtgctgaagactttggaactttgtcgtctgtatgaactcgagaatgttagtacaaac
atcatgaagattgcaggcatttatcattggaagcatggtagaaaaggaactggggtttac
tggttccagcaagcacatgataaagtacgacttgatagaattgctcaacagttgtttgag
cgcattgggaagtcagttgcagatgacaattttaagcaatgggaaggcttgctcgagtta
ctaggttctgacattggtagtgcaggtggtcttgaattccttcacaggtaccgggatttc
aagaggtcccttcaacaggcactagaaggaaggactggcgaggctgctcggcagacagtg
gagtttcttatacagctaatgagaaatccttccacaccacaacgtttctggctacccctt
ctacatgattcagtgaggctgcttaactgtaaaccctgccctttgttgaatgttgctgag
acgaccttgttactcaacaagctacaagaactgtcaatggcgaagttacgtcctgacttc
tgcactaatcacctaccaagccatgcactgagctccgtcaggttggctttggcatcaaat
cttgcccgcgccatccttgaagaaccttga
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