Lolium rigidum (rigid ryegrass): 124661009
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Entry
124661009 CDS
T09103
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 14-like
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lrd01002
]
124661009
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124661009
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124661009
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124661009
Peptidases and inhibitors [BR:
lrd01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
124661009
Ubiquitin system [BR:
lrd04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
124661009
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
124661009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
124661009
NCBI-ProteinID:
XP_047054823
LinkDB
All DBs
Position
6:326033704..326042602
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AA seq
795 aa
AA seq
DB search
MDLLRASLHKVRIPEPTNRIHKDECCVSFDTPRSDGGLYVDMNSFLAFGRDHVAWNFEKT
ENPVYLRIVQRRKPDPEEADRPLKKPTLLAIGVEGGFSEQEPEYDVTYEIVVLPEFASLP
FPSVDLPEKVRLAVDKVILAESADRKQQLASWVADKKLISAHAMDLQQLDNGVIVPPNGW
KCSKCDKTENLWLNLTDGMILCGRKVWDGSGGNNHAVEHYQQTKYPLAVKLGTITADLEG
ADVYSYPEDDSVEDPLLAQHLSHFGIDFSSLQKTEMTTAERELDHNTNFDWNRIQESGKD
AEPLYGPGYTGLVNLGNSCYMASIMQVMFSTHPFISRYFEKQSLKAAFAMSQADPTLDVN
MQMTKLAHGILSGKYSKPNQEGQVGIRPRMFKSVIAASHPEFSSMRQQDALDFFLHLIEK
VDQANHGDHQSNPFSGFKFIVEHRVQCPSGKVSYNTHSENNLSLSIPLHEATNKEQLEAF
HEKKAAMDLDGKEVSSEEIVRPRVPLEACLASFSGEDEVPDFYSTALNSKTTAIKTTGLK
TFPDYLVLQMRKFVMGEGWVPKKLDVYIDVPDIIDISHMRSKGVQPGEELLPEGASSGDK
VEPARPVANEDIVSHLASMGFNYVRCQKAAINTSNTGVEEAMNWLLSHMDDPDIDDPISQ
DPTSAESTIDEASVQTLISFGFQEDVARMALKASGGNIERATDWVFNNPDASSSVSADSS
ASNVKDEDPYITDGSGRYKLMAFVSHMGTSTHCGHYVAHVLKDGRWAIFNDSKVAASVDL
PKDMGYLYFFQRISS
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggatctgctccgcgcgagcctccacaaggtccgcatcccggagcccaccaaccgcatc
cacaaggacgagtgctgcgtctccttcgacacccccaggtcggatggcgggctgtacgtg
gacatgaactcgttcctggcgttcgggagggaccacgtggcctggaacttcgagaagacg
gagaaccccgtgtacctccgcatcgtgcagcgccggaagcccgaccccgaggaggcggat
cgcccgctcaagaagcccaccctgctcgccatcggagtggagggaggtttttctgaacaa
gaacctgagtatgacgttacttatgaaattgttgtcttgcctgaatttgcttctctccca
tttccatcagttgacttgccagagaaggttaggctcgcagttgataaagttatacttgct
gaaagtgctgatagaaagcaacaactggcttcatgggtggctgacaagaagctaatcagt
gcacatgctatggatctgcaacaactagacaatggtgtaattgtgcctcctaatggatgg
aagtgtagcaagtgtgataaaacagagaatctctggttaaatttaaccgatggtatgatc
ctctgtgggaggaaggtctgggatggaagtggtgggaataatcatgctgttgaacactac
cagcagactaaatatcctctagcggtaaagcttggaacaattactgctgatttggaagga
gcagacgtttactcatacccggaagatgacagcgttgaagatccactattggctcagcac
ttatcacattttggtatcgatttttcttcactccaaaagactgagatgaccactgccgaa
agagaacttgaccacaacacaaattttgattggaatagaatacaagaaagtggcaaagat
gctgaacctttatatggaccgggctatactggccttgtaaaccttggaaatagttgctat
atggcttcaataatgcaagttatgttttcaacccatccatttatatcaaggtacttcgag
aagcagagtttgaaagcagcattcgcaatgtcccaagctgatccaacattggatgttaac
atgcaaatgacaaagttggcgcatggtatactctctggtaaatattctaagcccaatcag
gagggacaagtaggaatacgtccccgtatgttcaagtctgttattgcagcaagtcatcct
gagttttccagtatgaggcaacaggatgccctggacttcttccttcatcttattgaaaaa
gttgatcaggcaaaccatggagaccaccagtcaaatcccttttcaggtttcaagttcatt
gttgagcaccgggttcaatgcccttctggcaaagtttcttacaacacacattctgaaaac
aatctttctttgagcataccgttgcacgaagcgactaacaaagagcagctagaagcgttt
catgagaagaaagctgcaatggacttggatggaaaggaagtgtctagtgaggaaattgtg
aggccaagagtcccactagaggcatgcttagcaagtttttcaggcgaagacgaagttcct
gatttttacagcactgcattaaattcaaagacaacagcaattaagactactggccttaaa
acttttcctgattacctggtgctgcagatgcgtaagtttgtaatgggggaaggatgggtg
ccaaagaaactcgatgtttatattgatgtgcctgatataatcgatatatcgcacatgcgc
agcaaaggtgtacagcctggggaagagctactacctgaaggagcttcttctggtgacaaa
gtagaacctgctcgtcctgttgccaatgaggacattgtgtcccaccttgcaagcatgggg
ttcaattatgttcgctgtcagaaagctgctataaatacatcgaatacaggtgttgaggag
gcgatgaattggctcctctcacacatggatgatccagatattgatgatccgatatctcaa
gatccaacgtctgctgaaagcactattgatgaagcaagtgttcaaactcttatatccttt
ggatttcaagaagatgttgcccggatggccttgaaagcttccggtgggaatattgagaga
gccacggactgggttttcaacaaccctgatgcatctagctccgtctctgctgattcttca
gcaagtaatgtaaaagatgaggatccatacataacagatggaagtggcagatacaagctg
atggcgtttgtgagccatatgggcacctctacccattgtgggcactatgtggcccatgtc
ctcaaagacgggaggtgggcaatcttcaacgacagcaaggtagctgcatctgttgacctg
cccaaggatatgggatacctctatttctttcagaggattagcagttga
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