Lolium rigidum (rigid ryegrass): 124661158
Help
Entry
124661158 CDS
T09103
Name
(RefSeq) katanin p60 ATPase-containing subunit A1-like
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lrd04812
]
124661158
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
124661158
Cytoskeleton proteins [BR:
lrd04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
124661158
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_33
TIP49
AAA_22
AAA_16
AAA_14
Mg_chelatase
AAA_28
IstB_IS21
AAA_17
RNA_helicase
PhoH
AAA_7
AAA_2
AAA_24
TsaE
nSTAND3
NPHP3_N
Parvo_NS1
AAA_18
Motif
Other DBs
NCBI-GeneID:
124661158
NCBI-ProteinID:
XP_047054971
LinkDB
All DBs
Position
6:complement(138510781..138516040)
Genome browser
AA seq
520 aa
AA seq
DB search
MANPLAGLQDHLKHARDYALEGLYDTSIIFFDGALAQINKHLTNLDDGFTRTKWMKCKQA
ISEEVEIVRQLDAQMKSFKEAPGSGTMRSSSPPIRSNKSFLFQPLDEYPTSSPQTFDDPD
VWAPPKDTPTRRSARGQSSAKKSSQDGAWSRGPSKTGTPSRGAKPNGSKSSSVVRSSTAS
SAGGRKGKSSSSKGDSASSDAEEGKSKKSQYDGPDGDLAAMLERDVLDSTPGVRWDDVAG
LSEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNV
SSATLASKWRGESERMVRCLFELARAYAPSTIFIDEIDSLCTSRGASGEHESSRRVKSEL
LVQIDGVNNSSTNEDGQPKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPSFESRKSLIN
INLRTVEVSSDVNIDEVAKRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDEIKNMSKDD
ISKDPVAMCDFEEALAKVQKSVSPSDIERHEKWMAEFGSA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccccctcgccgggctgcaggaccacctcaagcacgcgcgcgactacgcgctc
gagggtctctacgacacctccatcatcttcttcgacggcgccctcgcgcagatcaacaag
catctgactaatttggacgacggtttcactcgcacaaaatggatgaaatgcaagcaagct
atcagtgaagaggtggagattgtgaggcagcttgatgcccaaatgaagtcctttaaagaa
gctcctgggagtgggacaatgcggtcctcatcgcctcctattcgctctaataaatcattt
ctgttccaaccgttggatgagtatccaacatcatcaccacaaacctttgatgaccctgat
gtgtgggcgcctccaaaagatacaccaacccgaaggtcagcaagaggccaatctagtgcc
aaaaaatcctcccaagatggagcttggtcacggggtccgtcgaagactggaacacctagc
cgtggtgcaaagcccaacgggagtaaatcaagctctgtggtgagatcatctactgcttct
agcgctggtgggaggaaaggaaaatcaagttcaagcaagggtgattcagcgagtagcgac
gccgaagaaggcaagtccaagaagtcacaatatgatgggccagatggggacttagctgcc
atgcttgaaagagatgttctagattcgaccccaggagtgagatgggatgatgttgcagga
cttagtgaggccaaaagactccttgaggaggctgttgtgcttcctctctggatgcctgaa
tattttcagggtattcgtcgaccttggaaaggtgttcttatgtttggcccaccaggtact
ggaaagacccttttagcaaaggcagtagctacagaatgtggcacaacattctttaatgtt
tcttctgcaacattggcttctaaatggcggggggagagtgagcgcatggtccgttgttta
tttgaacttgcaagggcctatgctccaagtactatcttcattgatgaaattgactcccta
tgtacatctcgtggagcttctggtgagcatgaatcatcgaggagggtaaagtctgaactt
ctagtgcaaatagatggtgttaacaatagctctactaatgaagatggtcagccaaaaatt
gttatggttctggcagccaccaactttccatgggatattgatgaagcactcaggcggagg
ctggaaaagcgtatttacattccacttccaagttttgaaagcagaaagtcactcatcaac
attaatcttagaacggttgaggtgtcttctgatgttaacattgatgaagttgcaaagagg
acggaaggctacagtggggatgaccttaccaatgtttgccgtgatgcttcgatgaacggc
atgaggcggaagatcgcaggcaagacccgtgacgagatcaagaacatgtcaaaggacgat
atctcgaaggacccggtggccatgtgcgacttcgaagaggctttggccaaggtccagaag
agtgtctcgccctccgatatcgagcgacatgagaagtggatggctgagtttggatctgcc
taa
DBGET
integrated database retrieval system
