Lolium rigidum (rigid ryegrass): 124661304
Help
Entry
124661304 CDS
T09103
Name
(RefSeq) paired amphipathic helix protein Sin3-like 4
KO
K11644
paired amphipathic helix protein Sin3a
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124661304
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
124661304
REST complex
124661304
Heterochromatin formation proteins
Other heterochromatin formation proteins
124661304
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
HHD_RTEL1
PAH_ZNF598
At4g15545_C
DUF1722
Motif
Other DBs
NCBI-GeneID:
124661304
NCBI-ProteinID:
XP_047055126
LinkDB
All DBs
Position
6:complement(274131622..274140909)
Genome browser
AA seq
1417 aa
AA seq
DB search
MKRSREDAVSGSQLKRPTVAARSDPPTQPQPMPPAGPPAPAPQPQAAAPAQLSGGSAAAA
AAGQKLTTNDALVYLKAVKDKFQDNRAKYEEFLEVMRDFKSERIDTNGVIIRVKTLFNGY
PELILGFNTFLPKGFAIRLQDDKEKKPVDFVEAINFVNKIKSRFQRDEHVYKSFLDILNM
YRKDNKSIQDVYHEVAILFCDHKDLLEEFQHFLPDTSVSQQAETAPRAGLVKREAPLMPP
VGRSEKPRAYPSHADRDTSVDRPDVEHDRQRRRPDKERKAERDRRDYERDEKDVEHDSKD
LDVGLRKRKPFPSANLTGAEAQQGGLPENHGINGASASSYDNKDALKSVYAQEFHFCEKV
KEKLEYDAYQEFLKCLHIYSQEIITRSELKNLVNDILQHYPDLMDGFNEFLDHCENIDGF
LAGVFSKKQPGRLVKTEDKERDKEHEREERNRDRDREREKERLKEGASQKPSVTKDKYLS
KPISELDLSNCQRCTPSYRLLPKNYPMPPAGNRTDLGASVLNDHWVSVTSGSEDYSFKHM
RKNQYEESLFRCEDDRFELDMLLESVNAATKRVEELIEKMQDNSLKPESPIRMDEHLTPL
NLRCIERLYGDHGLDVMDVLRRNASVALPVILSRLKQKQEEWSRCRSDFNKVWAEIYAKN
YHKSLDHRSFYFKQQDSKSLSVKSLLTEIKEINEKKRKEDDVLIAIAAGNRRPIVPNMSF
EYVDSKVHEDLYKIVKYSCGEVCSSSDQLDKVMKMWTTFLEPILGVQPRSHGTMDADLIK
PKNGITKSSIATLGESNTTTDGVAAQQGHGDESKQQDQAPSGVVRLARLGKGVAADSQNG
SHDADRTARRDEEASNIAPNGGVQAAAFITDEMSAVSTQNMPTERSAVQHNNIKANSEIA
PGMNASRSSHAGVSVAGGARASHQLSPSIEAGETGRPGTSLNGGGTNEGNKGRLFNEPAA
SHNISKVEREEGELSPNGDFEEDNFVPMEDGASKTKEGSTSRTSKVRPGEVDTEAAGEND
ADDEGEESTQRSTEDSENASEAGEDPSGSESGDGDHCSREDHDEEEDMDHDDQDTKAESE
GEAEGTTETHDVEGGISLPLSERFLYSVKPLAKHVPTSLHCREEKSSHIFYGNDSFYVLF
RLHQMLYERLLSAKTNSASAEKKWRTSKDTNPPDLYAKFLNALYNLLDGSSDNTKFEDDC
RAIIGTQSYVLFTLDKLIYKVVKQLQAIATDEMDNKLLQLYLYEKSRSPGRFFDLVYHEN
ARVLLHDESMYRFECCSDPTRLSVQLMEYGHEKPEVTAVSIDPNFSSYLFSDFLSGLSDT
MLSDGVFLGRNKRKNSSSDEASDSLKTMDGVQVANGLECKISCKTSKVSYVLDTEDFLFR
LRKRRRLLASGIVPDKLQTSKKDAAKVQRFHSFLAKP
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctccagggaggacgccgtctcggggtctcagctcaagcgccccaccgtcgcc
gctcgatccgatccgccgacgcagccgcagcccatgcctccggcgggtccaccggcgccg
gcgccacagcctcaggctgccgcgccggcgcagctgtcgggcggttccgcggcggccgct
gccgcgggccagaagctgacgaccaacgacgcgctcgtctacctcaaggccgtcaaggac
aagttccaggacaaccgcgccaagtacgaggagttcctcgaggtcatgcgcgacttcaag
agcgagaggattgataccaacggggtgattatccgtgtcaagaccctgttcaacgggtac
cctgagctcatcctcgggttcaacaccttcctgcccaagggctttgcgatcaggctccag
gatgacaaggagaagaagcctgttgattttgtggaagccatcaacttcgtcaacaagatc
aagagccggttccagcgtgacgagcacgtctacaagtctttcctggacattctcaacatg
taccgcaaggataataagtccatccaagatgtttaccatgaggttgcgatactgttctgt
gaccataaagacttgctcgaagaattccagcacttcttgcctgatacctcggtgtctcag
caagcagaaactgctccaagagctggtttggttaagcgggaagcccctctaatgcctcct
gttggtaggagtgaaaagcctagggcttatccatcacatgctgaccgtgacaccagtgtg
gatcgtcctgacgtggagcatgatcgccagagaagacgtccggacaaggaacggaaggca
gaaagagataggagagattatgagagagatgagaaggatgttgaacatgacagcaaagac
ctggatgttggactgcgtaagcgtaaaccttttccaagcgcaaaccttacaggcgctgag
gcacagcagggtggtctcccagagaatcatggaataaatggtgcctcagcttcatcgtat
gataataaggatgcattgaagagtgtatacgcacaggagttccatttttgcgagaaagtc
aaggagaagctggaatatgacgcttaccaggagtttttgaaatgtcttcacatatacagc
caggaaattattacgagaagtgaattgaagaacttggtaaatgatatactacaacactac
ccagatcttatggatggatttaatgaattcttggatcattgtgaaaatatagatggattt
ttggctggagtcttcagcaaaaagcaacctggacggctagttaaaactgaggataaagaa
agagataaggagcatgagagggaggagaggaacagagaccgggacagggaaagagaaaag
gaaagacttaaggaaggtgctagccagaaaccttctgtcaccaaagacaagtatctatcc
aaaccaatttcagagcttgatctctcaaattgtcagcgatgcactcctagttaccggctt
ctacctaaaaattacccaatgcctccggcaggcaacaggactgatcttggagcctcagtt
cttaatgatcactgggtatcagtgacatcaggaagtgaagactattcctttaagcacatg
cggaagaatcagtatgaagaaagtttatttagatgtgaagatgacagatttgagctggat
atgctgttggaatcagttaatgcagcaactaagcgtgtcgaggagttgatagaaaaaatg
caagataactcgctaaaaccagaaagcccgatacgcatggacgagcatttaactcctttg
aacctaaggtgcattgaacggttgtacggtgaccatggcctggatgtgatggacgttctt
cggagaaatgccagtgttgcactgccagttatcttgagtaggctaaaacaaaagcaggag
gaatggtcaaggtgccgttcagatttcaacaaggtttgggctgaaatttatgccaaaaat
tatcacaagtcacttgatcatcgcagtttctatttcaagcagcaagattcgaagagcctg
agcgtaaaatctctattgaccgagattaaagaaattaatgagaagaaaagaaaggaagac
gatgtactcattgctattgctgctggaaataggcggcctatagttcccaatatgtcattt
gagtatgtggattcaaaagtccatgaagatctttataagatcgtcaagtactcgtgtgga
gaagtctgcagctcctcggaccaactagacaaagtgatgaaaatgtggacaacttttctg
gagccaattttaggtgttcagcctcgatcccatggtactatggatgcagatctgattaaa
cccaagaatggaatcacaaaatctagtattgcaactctgggggaaagcaatactactaca
gatggagttgctgcccagcaaggtcatggtgatgaaagcaaacaacaggatcaagcacca
tcaggtgtggttagattggcgcgactgggtaaaggagttgccgcagactctcaaaatggt
tcccatgatgcagatcgaactgctcgtagagacgaggaagcatcaaatattgcaccaaat
ggaggagtgcaagctgctgccttcatcacagatgaaatgtctgcagtaagtacccagaac
atgcctactgagagatcagcagtacagcataacaatattaaggcaaactcggaaattgca
ccaggaatgaatgcttctagaagttcacatgctggagttagtgtggctggtggtgccagg
gctagccatcaattatcaccatctattgaggctggagagactggcaggccaggaacatct
ttaaatggtggaggcaccaatgagggtaataaagggcgcctatttaatgaacctgcggca
tcacacaatatttcgaaagttgaaagagaggagggtgaattatctcctaatggagatttt
gaagaggacaattttgtgcccatggaagatggagcatctaaaacaaaagaaggttctaca
agcagaacatccaaggttagacctggtgaagtagatactgaggcagctggcgagaatgat
gctgatgacgagggtgaggaaagcactcaaaggtctactgaggacagtgaaaatgcttct
gaggctggtgaagatccatcgggaagtgaatctggcgatggtgatcattgttctcgtgaa
gatcatgatgaggaagaagatatggatcatgatgatcaggatacaaaggcagaaagtgag
ggtgaggcagaggggacaactgagactcatgatgttgaaggaggcatatcattaccttta
tcagaacgctttctgtactcggttaaaccactggccaagcatgtacccacatccttacat
tgtcgagaagagaaatcctcacatatattttatgggaatgattcattttatgtcttgttc
aggctgcatcagatgttgtacgaaagattgctttcagcaaagacaaactctgcgagtgct
gaaaagaaatggagaacctctaaggatacaaacccccctgacctatatgcaaagttcctg
aatgcactctacaacttacttgatggttcttctgataataccaagtttgaggatgactgc
cgtgctattattggtacccagtcttatgttctctttactttggataaactgatatacaaa
gttgtcaagcagcttcaagctatagcaacagatgaaatggacaacaagcttctccagctt
tatttatatgaaaaatcaagatctcctgggaggttctttgacctagtttatcatgaaaat
gcccgtgtcctactccatgatgagagcatgtatcgatttgaatgttgctcagatccaacg
aggttgtcggttcagctcatggaatatggtcatgaaaagcctgaagtgactgcagtatcg
attgatccaaatttttcctcatatctcttcagtgactttttgtcaggtttgtctgacaca
atgttgtctgatggtgtcttccttggaaggaataagcggaaaaattcaagtagtgatgag
gcctctgattcattgaagaccatggatggtgtccaagttgcgaatggtcttgaatgcaag
atatcctgcaagacctcgaaggtctcgtatgtccttgacacagaagatttcttgtttcgg
ttgagaaagcggaggagacttttagccagtggaattgtgcctgacaagttgcagacatca
aagaaagatgctgcaaaagtgcagcgcttccattcgtttctagccaagccttag
DBGET
integrated database retrieval system
