Lolium rigidum (rigid ryegrass): 124661314
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Entry
124661314 CDS
T09103
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124661314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124661314
03012 Translation factors [BR:
lrd03012
]
124661314
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
124661314
Translation factors [BR:
lrd03012
]
Eukaryotic type
Release factors
124661314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
124661314
NCBI-ProteinID:
XP_047055135
LinkDB
All DBs
Position
6:121130316..121135050
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AA seq
437 aa
AA seq
DB search
MSESQETDRNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQVARVAKMLGDEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPIN
VSLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDQRLQVKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKKLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDINRYALKHSVSGEIIVKHLNKEQEADQSNFRD
AETNAELEVQEKISLLEWFANEYKKFGCSLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDI
RSFDEASDDEGLYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagagccaggaaactgatagaaacattgaaatctggaagattaagaagctaata
aaggcactggaatcagctagaggcaatggcacaagcatgatctctcttattatgcctcca
cgtgatcaggttgctcgagtggcaaagatgttaggcgatgagtatggtactgcttcaaat
attaagagtagagtgaatcgccaatctgttttgggtgccatcacctcagctcagcagagg
ctgaagctctataacagagttcctcccaatggtttggttctctacactggaaccattgtt
actgatgatggaaaggaaaagaaagttaccattgactttgagccattcaagcctataaat
gtgtcgctgtacctttgtgataacaaattccacactgaggctttaaatgagctcttggaa
tctgatgacaagtttggcttcattgttatggatggtaacggcactctttttggcacactg
agtggaaatacccgtgaggtgcttcacaaattcactgttgatctcccaaagaagcatggt
agaggagggcagtcagctttacgttttgctcgtcttcggatggaaaagcgtcataactat
gtccgaaaaactgctgagcttgctactcagtttttcatcaatccagctacaagtcagcct
aatgtctctggactaattcttgctggttctgctgatttcaagacagagctgagccaatct
gatatgtttgatcagagacttcaagttaagatacttaatgtggttgatgtttcttacggt
ggtgagaatggtttcaaccaagctattgagttgtcagctgagattctagcaaatgtgaag
ttcatacaggagaagaagttaattggcaagtattttgaagagatcagtcaagatactgga
aaatatgtctttggtgttgatgacactctgaaggctcttgaaatgggtgctgttgagact
cttatagtgtgggagaatcttgatatcaacagatatgcgctgaagcacagtgtctctggg
gaaattattgtcaaacatctgaacaaagagcaggaagcggaccagagtaatttccgcgat
gctgagactaatgctgagttggaagttcaggaaaaaatctctttgttggaatggttcgct
aacgagtacaagaagtttggttgctcgcttgagtttgtcactaacaaatcacaggaggga
tctcagttctgtagaggatttggtggcattggtggtatgctgcgctatcagctagacatt
cggtcttttgatgaggcttccgatgacgagggtttgtacgaagactctgattag
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