Lolium rigidum (rigid ryegrass): 124661490
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Entry
124661490 CDS
T09103
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124661490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lrd03019
]
124661490
Messenger RNA biogenesis [BR:
lrd03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
124661490
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
124661490
NCBI-ProteinID:
XP_047055306
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All DBs
Position
6:complement(144189071..144192594)
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AA seq
159 aa
AA seq
DB search
MKEGMRTSVEAILLVQEHNHPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAV
NSPTFPPNWQVGECVAVWWRPNFETVMYPYCPPHIAKPKECKKLFIVHLTEKEYFAVPRN
LKLLAVPLFELYDNVQWYGPVISTIPQQLSKFQFNMVSS
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaggaatgaggacaagtgttgaagcaatcctgttggtgcaagagcacaatcac
ccccacattctgctgttgcaaattgggaatacattttgcaaacttcctggtggacggttg
aagcctggagaaaatgaaatcgagggcctgaaaagaaagctgtccagcaaacttgcagtg
aattctcctacttttccacctaactggcaggttggtgagtgtgttgctgtctggtggagg
ccaaactttgagactgtgatgtatccttactgccctccgcatatagccaagcccaaggag
tgcaagaagcttttcattgttcacctgactgaaaaggagtatttcgctgttccaaggaac
ctgaagctacttgctgttccactgtttgagctctatgacaatgttcagtggtacgggcct
gtcatttccaccatcccgcagcagctgtccaagttccagttcaacatggtgagctcgtaa
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