Lolium rigidum (rigid ryegrass): 124661506
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Entry
124661506 CDS
T09103
Name
(RefSeq) vacuolar protein sorting-associated protein 36-like
KO
K12190
ESCRT-II complex subunit VPS36
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124661506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lrd04131
]
124661506
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lrd04147
]
124661506
Membrane trafficking [BR:
lrd04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
124661506
Exosome [BR:
lrd04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124661506
Exosomal proteins of colorectal cancer cells
124661506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
EAD2
Flagellin_N
Motif
Other DBs
NCBI-GeneID:
124661506
NCBI-ProteinID:
XP_047055331
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All DBs
Position
6:complement(92214933..92218224)
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AA seq
441 aa
AA seq
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MSVAAADWLPSATVTASGRPVLSAGEIERHLLPLADLEPEENPRLAPLRGCLLALTSHRL
IFLHEPSLSARALPLASIVHPYPPHRKNSHNPLRSIFSSSSSSSHHPRIRLQISLPPARS
EVVAVVVTCKADVDVFYGRLVEAIRARAWEVAAAAVPASGASVAEGAPAREDLAIRMPVV
GVSGILRKEQETWESAGQNLQDAFQDLNALMSKAKEMMELAEKMRQKLLTNQSNSGDEEM
GSKQDMQDLLLSVGIVSPVTKETAGALYHQQLSRQLADFVRVPVERAGGMMALVDVYCLF
NRARGTELISPEDLLQACSLWEKFDVPVMLRKFDSGVKVIQTKTHSDDEVFARISSLAQK
PDALQKGISASDAAFTLGIAPALAKEHLLNAENKGLLCRDVSPDGFRFYINLFNEIDSQN
IYLTKTHGVYQTWISVATAAH
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgccgctgccgactggctcccgtcggcgaccgtcacggcgtccggccgtccg
gtgctgtccgccggcgagatcgagcggcacctcctcccgctcgccgatctcgagccggag
gagaacccccgcctcgcgcccctccgcggctgcctcctcgcgctcacctcccaccggctc
atcttcctccacgagccctccctctccgcgcgcgccctcccgctcgcgtccatcgtccac
ccgtaccctccccaccgcaagaacagccacaacccccttcgctccatcttctcctcgtcc
tcctcctcgtcgcatcacccgcgcatccgcctccagatctccctgcccccggcgcgatcg
gaggtcgtcgccgtcgtcgtcacctgcaaggccgacgtggatgtgttctacgggaggctg
gtcgaggccatccgcgcgagggcctgggaggtggccgccgcggctgttcccgcgagcggc
gcctcggtggcggagggagccccggcgcgggaggatcttgccatcaggatgcccgtggtt
ggagtgtcggggatactgcggaaagagcaggagacgtgggagagtgcgggacagaacttg
caggatgccttccaggatctcaacgccctcatgagcaaagccaaggaaatgatggagtta
gcagagaaaatgaggcagaagctattgacgaaccaatcaaattccggtgatgaagagatg
ggttctaagcaagacatgcaggatttattgttgagcgttggcatcgtgtctcccgtgaca
aaagaaactgctggcgctttgtaccatcagcagctttcacgacagctggctgactttgta
agagtgccagttgagagagcaggtggtatgatggcactagtcgatgtgtactgtctcttc
aaccgtgctaggggaacagagttgatctcaccagaggatcttttgcaagcttgctccctt
tgggagaaatttgatgtcccagtaatgctacggaaatttgatagtggagtgaaggtgatc
cagaccaagacgcatagtgatgatgaggtatttgcaagaatctcatcgcttgcgcaaaag
ccggatgctcttcagaagggaataagcgccagtgacgctgcatttacactggggattgcg
ccagctttagcaaaggagcatctccttaatgcagaaaacaaaggtctcctctgcagggac
gtcagtccagatggattccgcttctacatcaatttgtttaatgagatcgattcccagaat
atttatttgacaaaaactcatggagtttaccagacttggatctcagtggcaacggcagca
cattga
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