Lolium rigidum (rigid ryegrass): 124661541
Help
Entry
124661541 CDS
T09103
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 18-like
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lrd03009
]
124661541
Enzymes [BR:
lrd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124661541
Ribosome biogenesis [BR:
lrd03009
]
Eukaryotic type
Pre-60S particles
Helicases
124661541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
124661541
NCBI-ProteinID:
XP_047055359
LinkDB
All DBs
Position
6:complement(319668081..319671251)
Genome browser
AA seq
643 aa
AA seq
DB search
MASSSTSPATAAARKKRALTEQRFSELSPAISPEVVEALKRGGFRRCTPVQAATIPLLLS
HKDVAVDAATGSGKTLAFVVPVVEMLRRLPSPPKPHQVLGIIISPTRELSSQIYNVAQPF
FATLKGVSSILLVGGLDIKAELKKVEEEGANILVGTPGKLFDIMERLDSLEYKNLEILIL
DEADRLLDMGFQKQVTSIISKLPKLRRTGLFSATQTEAVEELAKAGLRNPVRVQVKTEAK
DAAQQDLGPSKTPLGLRLEYMICEPSKKSSQLVDFLVHNNGKKIMVYFATCACVDYWSVV
LPMLNLLKGSPVIPYHGKMKQGPREKALASFSALSSGILVCTDVAARGLDIPHVDLIVQY
DPPQDPNVFIHRAGRTARYDQEGDAIVFLLPTEDSYVEFLKLRGVPLMERECSSDIVDIV
PQIRAAASEDRNIMEKGLRAFVSFVRSYKEHHCSYIFNWKGLEVGKLAMEYGLLQIPSMP
EVKHNNLSLKGFMPVSNVNFSQIKFKDKTREKQRQKVLKRKAEELAQEPPEPERRVREKP
LKPKRKQTGKQRQTIQTKEDMDELTHEYRLLKKLKKGVIDEDEYEKLTGFGDSDGGGSSD
GEDKGMERRRKEQKKLKQRGGKTRGGSARKFDGKSSKLKNRRK
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctccacctcgccggcgacggcggccgccaggaaaaagcgcgcgctgacg
gagcagcggttctcggagctgtccccggccatttccccggaggtggtggaggccctgaag
cgcggcggcttccggcggtgcacgcccgtgcaggcggcgaccatcccgctgctgctgtcg
cacaaggacgtggccgtcgacgccgccaccggctccggcaagaccctcgccttcgtcgtc
cccgtcgtcgagatgctccgccgcctcccctcgcctcccaagccccaccaggttctgggc
atcatcatctccccgacgagggaactgtcgtcgcagatatacaacgtggcgcagcccttc
ttcgcgacgctcaagggcgtgtcgtccatcctcctggtcggcgggctggacatcaaggcg
gagctcaagaaggtggaggaggagggcgccaacatactggtcggcacacccgggaagctc
ttcgacataatggagcgcctggactccctggagtataagaatctcgagatactgatcctg
gatgaggcggataggctcttggacatgggcttccagaagcaggtcacctcgattatttca
aagttaccgaagctgaggagaaccgggctgttctccgctacacagactgaggctgtcgag
gagctggcaaaagcagggttgaggaatcccgtgagggtccaggttaagacggaggccaag
gatgctgctcagcaagatcttggtccatccaagacgccgctggggctccggttggagtat
atgatatgtgaaccatcaaagaaatcatcacaacttgttgatttccttgtgcacaacaac
ggaaagaaaatcatggtatattttgcaacatgtgcctgtgtagattactggtctgttgtt
cttccaatgctcaacttacttaaaggttctccagtaataccttaccatggaaagatgaaa
cagggccctcgtgagaaagctctggcgtcattttctgctctttcaagtggtattttagtc
tgcactgatgttgcagcaaggggtcttgacataccacatgttgatctaattgtgcagtac
gatccacctcaagatcccaatgttttcatacatagagcaggtcgcactgcccgctatgat
caagaaggagatgctattgtatttctcttgccgacggaggattcttatgttgaattctta
aagcttcgaggtgtacctctcatggaaagggagtgttccagtgatattgtagatattgtg
ccacagatcagagcagctgcatcagaagatcgtaatatcatggaaaaggggcttcgagct
tttgtatcatttgttcgttcatacaaggagcatcactgctcgtacattttcaattggaaa
ggacttgaagtaggaaagctggccatggagtatggcttacttcagatcccatccatgcca
gaagtgaagcacaataatctttcactgaagggatttatgcctgtcagcaacgtcaacttt
tcacaaatcaagttcaaggacaaaactcgagagaagcaacgccagaaggtactgaaaaga
aaagcggaagagctagctcaagagccacctgagccagaaaggagagttcgggagaagcct
cttaaaccaaagcgcaagcagacgggcaagcagcgacagacgatccagaccaaggaggac
atggatgagctgacgcacgagtaccggctcctgaagaagctgaagaagggggtgatcgac
gaggatgagtatgagaagcttaccgggttcggagactcagacggtggaggttcttcggac
ggggaggacaaagggatggagaggcggagaaaggagcagaagaaactcaagcagagagga
gggaagacgagaggagggtctgctaggaaatttgatggaaagagtagtaagctgaagaac
aggagaaaatga
DBGET
integrated database retrieval system
