Lolium rigidum (rigid ryegrass): 124661544
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Entry
124661544 CDS
T09103
Name
(RefSeq) long chain base biosynthesis protein 1a-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd00600
Sphingolipid metabolism
lrd01100
Metabolic pathways
Module
lrd_M00094
Ceramide biosynthesis
lrd_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
124661544
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lrd01007
]
124661544
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
124661544
Amino acid related enzymes [BR:
lrd01007
]
Aminotransferase (transaminase)
Class II
124661544
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
124661544
NCBI-ProteinID:
XP_047055365
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Position
1:312285052..312288039
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AA seq
481 aa
AA seq
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MALPIVKATTAVLARVSAAFNTPLTCSVVFGVHVDGTRLVVGGLLIAAIVFQLSRKSYKH
PNKALTKKEVDELCGEWEPEPLCPPIKEGARINAPILESAAGPHTAINGKEVVNFASANY
LGLIGNEKISECCVRSLEKYGVGPCGPRGFYGTTDVHLDCEAKIANFLGTPDSALYSYGI
SAIFSVIPAFCKKGDIVVADEGIHWAVQNGLDLSRSTVVYFKHNDMASLASTLEKLTHGN
THTDKIRCYIVVESIYQNSGQIAPLDEIIKLKEKYQFRVMLEESHSFGVLGKCGRGLAEH
YGVPIEKIDIITAAMGNALATDGGFCTGSARVVDHQRLSSSGYVFSNSLAPYLATAAVSA
VNYLEENSSVLSILRSNVALLHKGLSGTSGLEICSHLLSPMVFLKLKKSTGSLDADLDLL
GTIAEQALNEDSVFIVASKRSSLDRCKLPVGIRLFVSAGHTESDISKVCSSLNRISSLVL
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgccgattgtgaaagccaccacagcggtgcttgctcgtgtctccgctgcgttc
aacacccctcttacctgttcggtcgttttcggggttcacgtcgatggaacacgcttggtc
gtgggaggacttcttatcgcggccatagtattccagctttccaggaagagctacaaacat
ccaaataaggcacttaccaaaaaggaggttgacgagctatgcggtgaatgggaaccagaa
cctttatgtcctccgatcaaggagggggcccgaatcaacgcaccaattttagaaagtgct
gctggaccacatacagcaattaacgggaaagaagttgtaaactttgcatcagcaaactat
cttggtttaatcggcaacgagaaaatttctgagtgttgtgttcgctcgttggagaaatat
ggcgttgggccatgtggtccacgtggcttttatggaacaactgatgtgcaccttgactgt
gaggcaaaaatagcaaacttcctggggacgccggactctgctctgtattcatatgggata
tctgccatattcagtgtgatacctgccttttgtaagaaaggagatatcgtagtggctgat
gagggcattcactgggcagtgcaaaatggtctcgatctatcaagaagtactgttgtttat
ttcaagcataatgatatggcttcactcgctagcactttggaaaaacttactcatggaaac
acacatactgataagattagatgctacattgttgttgaatctatttaccagaattctggt
cagattgctccactggatgagataatcaaattgaaggagaaatatcagttccgtgttatg
ctggaggagagtcattcgttcggtgtgcttggcaagtgtggccgaggccttgctgaacat
tatggagttccaattgaaaaaattgatattatcactgctgcaatgggaaatgcattagct
actgatggtggcttctgtacaggaagtgccagagttgttgaccatcagcgtctaagcagc
tctggctacgtgttctctaattctctagcaccttatcttgccaccgctgctgtttctgct
gtaaactacctggaggaaaattcttcagttctgagtatcctgaggagcaatgttgctctt
ttgcataaaggactgtcaggtacgtcaggactagaaatttgtagccatcttctgtcacct
atggtcttccttaagctcaagaaatcgacaggttcgcttgacgctgacctggatcttctt
ggaaccattgccgaacaggctttgaatgaagactcggttttcattgtggcatccaagagg
tcaagtttggacaggtgcaagcttccagttgggattcgcctgttcgtatccgcaggtcac
acggaatcagacatctccaaagtatgttcatccttgaacagaatttcctcattggtcctc
cgttga
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