Lolium rigidum (rigid ryegrass): 124661573
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Entry
124661573 CDS
T09103
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
124661573
Enzymes [BR:
lrd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
124661573
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
124661573
NCBI-ProteinID:
XP_047055399
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Position
1:complement(312533728..312536982)
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AA seq
689 aa
AA seq
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MAAVQIVQLAAITSSLVLLLLQPVAAKMVPPAAAPGARDSAGVTLHVQRHQVLVENGVVQ
VSVSKPQGQITGVRYAGERNLLHFGSGDENSGGYWNVFWNFPGSGQPRGRIDMLDSTDFR
VVSSSKEQVELSFRSTYDPSRFNSVRLTVDKRLVMLRGSSGFYCYAIFEHANSWPALNIT
EARLAFKLNTARFNYMAVSDRIQRYMPRAADRDPPRGKPLAYKEAVLLINPAEPQFRGEV
DDKYQYSLDNKDNKVHGWIGGGPVPLGFWVITPSNEFKSGGPLKRELTSHVGPTSLTMFL
GTHYVGNDIVAKIDDGEHWKKVMGPVFIYLNSNPSRGSFQALWEDAKAQAEAEARKWPYT
FLESPDFHKAADRGSVTGRLLVRDKYMSGVDMPARLAYVGLAAPGAPGSWATESKGYQFW
TRASATCGSFAIGNVLAGEYNLYAWVPGILGDYMYAASVTVSAAGAVSLGDLVFEPPRSG
PTLWEMGVPDRSAAEFFIPDPNPKYLSKLFLTRDNKYRQYGLWDRYADLYPRADPVFTIG
VSNYSNDWFFAHVTRKVGGGVGLTNAPTTRRIRFNLGRVVADGTYTLRVALAAAQMSRLQ
VQVNEATRKGSEGVFNTPEFGDGNAIARHGDHGTWWSFEFPIKGYLLMEGENTISITQVR
AFSEFFGVMYDYIRLEGPSGSWRDPTTLL
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggttcagatagtccagctcgccgccatcacgtcgtcgctggtgctgcttctg
ctgcaaccggtggcggcaaagatggtgccgccggcggcggcgccgggagcacgcgacagc
gccggcgttacactgcacgtacagcgacaccaggtgctggtggagaacggcgtggtgcag
gtttcggtgtcgaagccgcagggacagatcaccggcgtccgctacgccggcgagcgcaac
ctcctccacttcggtagcggcgacgaaaattccggcgggtactggaacgtgttttggaac
tttccagggtccggtcagccaagaggcaggatcgacatgctggacagtacagacttcagg
gtggtttcttccagcaaagagcaagtggagctctccttcaggagcacctacgacccatca
cgcttcaacagcgtccggctcaccgtcgacaagcggctggtgatgctgagaggcagctcc
gggttctactgctacgccatctttgagcacgcgaacagctggccggcgctgaacatcacg
gaggcacggctcgccttcaagctcaacacggcgaggttcaactacatggcggtgtcggac
aggatccagaggtacatgccgagggcggcggaccgggacccgccccggggcaagccgctg
gcgtacaaggaggccgtgctgctgatcaaccccgcggagccgcagttcaggggggaggtg
gacgacaagtaccagtactcgctcgacaacaaggataacaaggttcatggctggatcggc
ggcggacccgtccccctggggttttgggtcatcaccccgagcaacgagttcaagagcggc
gggccgcttaagcgcgagctcacctcgcacgtcggcccaacctccctcacgatgtttctt
ggaacacattacgtcgggaacgatatcgtggccaagatcgacgacggcgagcactggaag
aaggtgatggggccggtgttcatctacctcaactccaatccgagcaggggaagcttccag
gcactgtgggaggacgccaaggcgcaggcggaggccgaggcgagaaagtggccctacacc
ttcctggagtcgccggacttccacaaggccgccgacaggggctccgtcaccggcaggtta
ctggtcagagacaagtacatgagcggcgtcgacatgcccgcccgactggcctacgtcggc
ctggccgcgcctggggcacccggctcctgggcgactgagagcaaaggctaccagttctgg
acgagggcttcggcgacctgcggcagcttcgccatcggtaatgtcctcgctggggagtac
aacctctacgcctgggtacccgggattctcggcgactatatgtatgccgcttcggtgacc
gtgtcagccgccggcgctgtgagcctcggcgacctcgtcttcgagccgccgcgatcgggc
ccgacgctctgggagatgggcgttcccgaccggagcgctgccgagttcttcatcccggac
cccaaccccaagtatctcagcaagctcttcctcacaagagacaacaagtaccgccagtat
ggactgtgggataggtacgccgacctgtaccccagagccgaccccgtcttcaccatcggc
gtgagcaactactccaatgactggttctttgcgcacgtcacaaggaaggtgggcggcggc
gtcggcctgaccaacgcgccgacgacgcgtcggatccggttcaacctcggccgcgtggtc
gccgacggcacctacacgctgcgtgtcgccctggcggcggcgcaaatgtccaggctgcag
gtgcaggtgaacgaggcgacgaggaaggggtccgagggagtgttcaacacgcccgagttc
ggcgacggcaacgccatcgcgcggcacggcgaccacggcacctggtggagcttcgagttt
cccatcaaagggtacctgctcatggaaggggagaacacgatcagcatcacgcaggtcagg
gccttcagcgagttcttcggggttatgtatgattacattcggctcgaagggccttccggt
tcttggcgagatcccaccacactactttga
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