Lolium rigidum (rigid ryegrass): 124661580
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Entry
124661580 CDS
T09103
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lrd03036
]
124661580
Chromosome and associated proteins [BR:
lrd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124661580
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DUF5340
Motif
Other DBs
NCBI-GeneID:
124661580
NCBI-ProteinID:
XP_047055407
LinkDB
All DBs
Position
6:91153347..91160813
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AA seq
829 aa
AA seq
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MFMPVSDHVQMGLGKTLQAISLLSYLKIKSIAPGPFLVLCPLSVTDGWLSEFGKFCPSLK
VIQYVGDKVHRRNLRRPMHEDVQKSSVSSGSNVLPFDVMLTSYDIALMDQDFLSQIPWLY
VVIDEAQRLKNPSSVLYNVLEERFIMPRRLLLTGTPIQNNLSELWALMHFCMPSIFGSLD
EFLSTFKEAGNLLLGSQANKANRQCKILKHILRAFMLRRTKALLIKSGILELPPLTELTV
MVPLTPVQKKIYLSVLRKELQTLLSFTGGSSRHQSLQNIVVQLRKACSHPYLFSGIEPEP
YEEGEHLVQASGKLLVLDLVLKKLHRLGHRVLLFAQMTQTLDILQDFLELRDYTYERLDG
SVRAEERFTAIRNFSSQPTKGVVGDDNNPSGAFVFMISTRAGGVGLNLIGADTVIFYEQD
WNPQADKQALQRTHRIGQLNHVLSINLVSQRTIEEVIMRRAERKLKLSHNIFGDEDTTDR
KGKDLGNEASDMRSIIFGLHKFDPADTAAETINEETLEKLESMSENVVKMRSHEPSEKDG
RAFEINPNSTDGSGAVITRAYDSIKIDPGVDEAAYLSWVEKFKETSHSIENVTVELEKQR
SAPEEKLLKREANKKKAEEKRLAKWKDLGYETLAVKDPDNIPNQIISDSGSVQLVYGDCT
DPSKLCAAKPAIIFSCVDNSGTWGRGGMFDALTGLSTHIPDAYKRASESDDLHMGDLHLI
QLDEDNCSRTLDAPLWVALAVIQSYSPKRKIPRSGISIPDLELCLSKAAFSAAQRSASIH
MPRIGQQSGSQRSEWYTIERLLRKYASLHGIDIFVYYFRRSPKQQPDSD
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgcctgtctctgaccatgtgcagatggggctggggaagaccctgcaagcaatt
tctcttctgagctacctgaagataaaatccattgcgccgggaccgttcctggtgctatgc
cctctgagtgtgacagatggctggctctcggaattcggcaaattctgcccttccttgaag
gtcatccagtatgtcggcgataaggtgcatcgccgtaacctacggagacctatgcatgaa
gatgtccagaaatcttcagtatcatctggttcgaatgtattaccatttgatgtgatgctg
acgagctatgacatagccttgatggatcaggacttcctttcgcaaatcccctggctctat
gtggttattgacgaggcccagcgtctgaaaaatccatccagtgtattgtataatgtcctt
gaagagcgttttatcatgccaaggcgtctactactgacaggcactcctatccagaacaac
ctttctgaactatgggcgttgatgcacttctgcatgccttcaatttttgggtcactcgat
gaattcctgtctactttcaaggaagctgggaatttgctactaggtagtcaagctaataaa
gcaaacagacaatgcaagatccttaaacatatactcagagcatttatgctgcgacgaaca
aaagctttactaattaagagcggaattctggagttgcctccattaaccgagctgacagtg
atggtacctttgacacccgtacagaagaagatatacttatcggtgttgagaaaagagttg
caaacacttctttcattcactggtggatcttctcgtcatcagtctttgcaaaacattgta
gtacaactgcgaaaagcctgcagtcatccatatctattcagtggcattgagcctgagcct
tatgaggagggggagcatttagttcaggctagtggaaagcttcttgtgctagatcttgtt
cttaagaagctccacaggttaggtcatcgtgttctgctatttgctcagatgactcagaca
ctggacattctgcaggatttcctagaactgcgtgattacacatatgagcgcctggatggt
tcagtacgtgccgaggagcggtttacggcaataagaaatttcagctctcaacctaccaaa
ggtgttgtgggagatgacaacaatccaagtggagcttttgtgttcatgatatcaactaga
gcaggtggtgttgggcttaatctcattggtgctgacactgttattttttatgaacaagac
tggaatcctcaagctgacaaacaggctttgcagcgtactcaccgcatcggacagttgaat
catgtattatcaataaatctggtatcacagcgcacaattgaagaggtcatcatgcgaaga
gcagagagaaaacttaagcttagccacaatatttttggagatgaggatacaaccgaccgg
aaagggaaagatctggggaatgaagctagtgacatgcgttcgatcatatttggcttacac
aaatttgaccccgcagatacagctgcagaaacaatcaatgaggagacactggaaaaattg
gaatcaatgtcagaaaatgttgtcaagatgcgcagtcatgaaccttcagaaaaggatggc
cgagcatttgaaatcaatccgaattcgactgacggtagcggggcagtgattactagagct
tatgattctattaaaattgatcctggggttgacgaagctgcatacctctcctgggtggag
aagtttaaggagacttcacattctattgaaaatgtcacagttgaactagaaaagcaaaga
tcagcacctgaagaaaagctcttgaaacgtgaagctaataagaaaaaagctgaagaaaag
agattagccaagtggaaagatttgggatacgagacattagcggtcaaagatcctgataac
ataccaaatcagattatttctgactcaggatctgtccaacttgtatatggagattgcact
gatccatcaaaactttgcgctgcaaagcctgccataatattcagttgcgtagataattct
gggacatggggacgtggaggaatgtttgatgctttgacaggtctctcgacacacattcca
gatgcttataagcgtgcttctgaatctgatgatcttcacatgggggatcttcacttgatt
cagctagatgaagacaactgtagccggactttggatgcacctctatgggtggcactagct
gttatccagtcttatagtccgaagcgtaaaattccaagaagtggaatctcaatacctgat
ttggagctgtgtttatcaaaggcggccttctcagctgctcagcgttctgcgagtatccat
atgccccggatcggtcagcagagtggctcccaaagatcagagtggtataccattgaacgc
ctgctcaggaaatacgcatcacttcatggcatcgacatttttgtgtactacttcaggcga
tcacccaagcaacagccagattcagattaa
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