Lolium rigidum (rigid ryegrass): 124661694
Help
Entry
124661694 CDS
T09103
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic-like
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124661694
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lrd03400
]
124661694
Enzymes [BR:
lrd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124661694
DNA repair and recombination proteins [BR:
lrd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124661694
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Rho_N
Motif
Other DBs
NCBI-GeneID:
124661694
NCBI-ProteinID:
XP_047055527
LinkDB
All DBs
Position
6:86127732..86133308
Genome browser
AA seq
508 aa
AA seq
DB search
MQQLLRGASLLRLYKCSRGLPSANFSCRKLVLTKLNVMSEGIRATYSRRAASKNVEIKKD
DQTIIEKEDVTESSLEIERIRGDPSMLQSMTVKELRELTRRMGVSGKGNKKDLVSALMDS
LGQEVTDKDGASTVEKVGPSEVPSKRKGAASVVVEQNLETSEVTSETPSKRSRTKQKSTK
GTIPKENSVTTVKLNKTSIQKETVVVHGTVDDAEPWTLLVHKKPRPEWIPYNPKVMRPPP
LGKDTRAVKILSWNVNGLRALMKSRGFSVHELAQREDFDILCLQETKMQEKDVEVIKESL
LEGYTNSFWTCSVSKLGYSGTAIISRVKPLSIKYGLGVADHDTEGRVVTVEFDDFYLLTA
YVPNSGDGLKRLTYRVTEWDPCLGNYMKELEKSKPVILTGDLNCAHQEIDIHDPAGNSRS
AGFTKEERKSFETNFLSKGFVDTFRKQHPDVVGYSYWGYRHNCRKTNRGWRLDYFLVSES
IAERVHDSYILPDVSASDHSPLGLILKL
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagctcctgcgcggcgcctcgctcctccgtctctacaagtgtagccgtgggctt
ccaagtgcaaacttcagttgcagaaagttagtgcttacaaagctgaacgtgatgagtgag
gggattcgggctacgtattcacgccgagctgcctctaagaacgttgagatcaagaaagat
gaccagacaatcatagagaaggaagatgtcactgaaagctcgttggagatagagcgaatc
agaggtgatcctagtatgctccaatccatgacagtgaaagagctcagggaactcacaagg
aggatgggagtttctgggaaaggtaacaagaaagacttagtatcagctctgatggattct
ctgggccaggaagtaactgataaagatggagcatcaacagttgagaaagttggcccgtca
gaagtaccttcaaaaagaaaaggtgctgcttcagtagtagttgaacaaaatttagaaact
tctgaagttacttctgaaactcctagcaagagaagtagaacaaagcagaaatcaactaag
ggcaccattccgaaggagaattctgtgactactgtcaagctaaataagacatcaatccag
aaggaaacagttgttgttcacggtactgtggatgatgcagagccttggactctacttgtg
cacaagaagccacgacctgagtggattccctacaatccgaaggtcatgaggcctccaccc
cttggcaaggatacaagggccgtaaagattctatcatggaatgtcaatggactgagagct
ttgatgaaatctaggggcttctctgttcatgagttagcacagagggaggattttgatata
ctatgcctgcaagagacgaaaatgcaggagaaagatgttgaagtcatcaaggaaagtcta
cttgaaggctataccaatagtttctggacatgcagtgtatcgaaacttggctattcgggg
actgccataatttcacgggtgaaaccactttctatcaagtatgggcttggtgtagcagac
catgatacagaagggagggttgtgacagtggaatttgatgatttttacttgctaaccgct
tatgtaccgaattctggtgatggtctaaaaagactgacttacagggtcacagagtgggat
ccatgccttggtaactacatgaaagaattggaaaaatcgaaacctgtcatactgactggt
gatcttaactgtgcgcaccaggagattgatatacatgatcctgctggaaatagtagaagt
gctggcttcacaaaagaagaaaggaaatcattcgagactaacttcttgtccaaagggttc
gtcgatacgtttcggaaacagcatcctgatgttgttggatatagctactggggctacagg
cataactgccggaagactaatagaggttggcgcctggattactttctcgtgtcggagtcc
atcgcagaacgagtccatgactcgtacatcctcccggacgtttctgccagcgaccacagc
ccacttggcctcatactgaagctctag
DBGET
integrated database retrieval system
