Lolium rigidum (rigid ryegrass): 124661785
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Entry
124661785 CDS
T09103
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Pathway
lrd04120
Ubiquitin mediated proteolysis
lrd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124661785
04120 Ubiquitin mediated proteolysis
124661785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lrd04121
]
124661785
Enzymes [BR:
lrd01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124661785
Ubiquitin system [BR:
lrd04121
]
Ubiquitin ligases (E3)
U-box type E3
124661785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
124661785
NCBI-ProteinID:
XP_047055627
LinkDB
All DBs
Position
6:complement(294948398..294951385)
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AA seq
995 aa
AA seq
DB search
MTSPFTPAASRPQRSPDEVEDIILRKILLITLTPPSSPNPAVAYLELTAAELLSESRPLL
AVHDNAERILIGRLSIPDPPANSPPPFAFLAAAFRRAADEARKITTIRDAGLQARLKASI
AHTRGLVLSYARIVAGNPHTFPSPPNAPHPAAELLIFLLAEAADPLDPTPAPGAPPPPGF
LDELLGDEAIEPAMGELYERLRQTVEKVSALGDFQRPLRVLRRLVGFPSCAKALVHHPKW
IPKNQIMLIGEGRAMELSSLLGAFFHVSAIPDREFASQPDVGQQCFSEASSRRPGDLVSS
FAAIKSVTNCLQDGLRDVLLALLKNPDTRGKVLEFLAELINKNVGRSGMHVDPLKCASSG
TFVNLSAVMLRLCEPFLDQMESKKGKIDVKYLFCNHRIDFEDLTAINASSEQVSSWTQSW
SHAHAQENFSFICECFFMTARVLNMGLMKAVADFKHLSEDLARCEDDLEANIAFREHSSP
HLERDIKRLERMVAALSQEKYCYEAQILTDGAFLQRALSFYRLMILWSVDLVGGFKMPLP
SQCPMEFSCIPEHFLDDAMDLLVLTSRVDSKALEGFPLDDFLSFNIMFMASSSYIKNPYL
KAKMVQVLNCWMPQRSSLTSTASLFEGHQLCLDYLVPNLLKLYVDIEFTGSHTQFFDKFN
IRHNIAELLEYLWDVPSHRNAWRQIAKQEEKGVYLNFLNFLINDSIYLLDESLNKILELK
EIEAEMVNTVAWNSRPAQEREERLRVFHQSENIVRFDMKLANEDVGMLAFTSEQIPAPLL
LPEMVERVASMLNYFLLQLAGPQRKSLTVKDPKKYEFKPKQLLKQIVTIYVHIARGDKEA
IFPAAISKDGRSYSEQLFATAANILWKIGADPQIIQEFTQLAGKAKAAASEAMDAEAILG
DIPDEFLDPIQYTLMEDPVVLPSSRVTIDRPVIVRHLLSDSTDPFNRSYLTQDMLLPDTD
LKLRIQEFIRCQQFRARPAADSVMEEPDGGSDMVE
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccccgttcacgccggcggcgtcgcggccgcagcgctctcccgacgaggtcgag
gacatcatcctccggaagatcctcctcatcaccctcacgccaccatcctcgcccaacccc
gccgtcgcctacctcgagctcaccgccgccgagctcctctccgagtcgcgcccgctcctc
gcggtgcacgacaacgccgagcgcatcctcatcggccgactctccatcccggacccgccc
gcaaactcgcctccaccgttcgccttcctcgccgccgcattccgccgcgctgccgacgag
gcgcgcaagatcaccaccatccgcgacgccggcctccaggcgcgcctcaaggcgtccatc
gcccacacccgcggactcgtcctctcctacgcgcgcatcgtggccggcaacccacacacc
ttcccgtcgccccccaacgcgccccacccagccgcggagctgctcatctttctactcgcc
gaggccgccgacccgctcgaccctaccccggcccccggcgccccgccgccgccgggtttt
ctcgacgagctcctcggggacgaggccatcgagccggcgatgggcgagctctacgagcgt
ctcaggcagacagtggagaaggtgtcagcgctcggcgacttccagcggccgctccgtgtg
ctcaggcggcttgtcggattccccagctgcgccaaggctctagtgcaccatcccaagtgg
attcccaagaatcaaatcatgctcatcggggaagggagagccatggagctctccagcttg
cttggagccttcttccacgtgagcgcgatccccgaccgtgagtttgcaagccagcctgat
gtcgggcagcaatgcttctccgaggcatcgtcgcgccgcccaggtgacttggtgtcatct
ttcgctgctatcaagagcgtcacgaattgcttgcaggatggactcagggatgttcttctg
gcgctgcttaaaaatccggatactcgaggcaaggttcttgagtttctagcggagctgatc
aacaaaaacgtggggagatctggcatgcatgtggaccctctaaaatgcgctagctcgggt
acgtttgtcaatcttagcgctgtgatgctccgtctatgcgagccttttctggatcaaatg
gagtctaagaagggcaagattgatgtcaagtacctcttctgcaaccacagaatcgatttc
gaagatttgaccgcgataaacgcatcttcggaacaagtgtcttcatggacacagagctgg
agccatgcgcatgctcaagagaatttctcgttcatttgcgaatgtttcttcatgacggcc
agggtactcaatatggggttgatgaaagctgtagcggatttcaaacacctctctgaagat
ctcgcgagatgtgaagatgatttggaagcaaacatagcattcagagaacattcatcgcca
catcttgagcgagatataaaacgtttggagaggatggtcgcggctttatcacaagagaag
tactgctatgaagctcagatactaacggacggtgcgtttcttcagcgtgctctgtctttc
tacagactaatgatattgtggtcagtagatcttgttggtggatttaagatgcctttgcca
tcacaatgccctatggagttttcttgcattccggagcattttcttgacgatgcaatggat
ttactcgtcctaacctccagagttgatagtaaagctttggaaggattcccattggatgac
tttctcagtttcaacatcatgttcatggccagttcttcttacattaaaaatccttatctg
aaagcaaagatggttcaagttttgaactgctggatgccgcaaagaagcagcttgacatcc
acagcctcattatttgaggggcaccagctatgtcttgattatctagtaccaaaccttctg
aagctttacgtggacatcgaatttactggctcccatacacagttctttgacaaatttaat
atccgacacaatattgctgagcttctggaatatttatgggatgttcccagtcatcgaaat
gcttggagacaaatagcaaaacaagaggagaagggtgtatacttgaattttttgaacttc
ctgatcaatgatagcatctatcttcttgatgagagcttgaacaaaattcttgaactcaag
gaaatagaggctgaaatggtgaacactgttgcgtggaatagcagacccgctcaagaaagg
gaggagcgtttgcgtgtatttcatcaatcagagaatattgttcgttttgatatgaagctg
gcaaatgaggatgttgggatgcttgccttcacgtcagaacaaattccagcgcctttactt
cttccagaaatggtggaaagggtggcaagcatgctaaattacttcctcttgcaacttgct
ggtccacagaggaaatcactgaccgtaaaggatcctaagaagtatgagttcaagccgaag
cagctattgaaacagattgttaccatctatgtccacatcgcaaggggtgataaggaagct
atctttcctgctgcaatctcaaaagatggacgatcatacagtgagcagctgtttgctact
gcagctaatattttgtggaagatcggggcagatccacaaatcatacaggagtttacccaa
ctcgccggtaaggcaaaagctgctgcctctgaggccatggatgctgaagctatccttggg
gatataccagatgaatttcttgatccaattcagtatactctcatggaagatcctgtggta
ctaccatcgtcgcgggttacaatcgatcgtccagttattgtccggcatttgctcagtgac
agtaccgatccattcaacaggtcctatctcacacaagacatgttgttaccagacacggat
cttaagttgcgcatccaagagtttatcaggtgtcagcagttcagggcacggccggctgcc
gactccgtgatggaggagcctgatggcggttctgatatggtcgaatga
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