Lolium rigidum (rigid ryegrass): 124661873
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Entry
124661873 CDS
T09103
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lrd
Lolium rigidum (rigid ryegrass)
Brite
KEGG Orthology (KO) [BR:
lrd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lrd03016
]
124661873
Enzymes [BR:
lrd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
124661873
Transfer RNA biogenesis [BR:
lrd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124661873
Prokaryotic type
124661873
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
124661873
NCBI-ProteinID:
XP_047055719
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All DBs
Position
6:complement(80714287..80734546)
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AA seq
705 aa
AA seq
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MRCRHFLNPILSPLSFAKPPSRPLACRAGAVAQPPGQRRAALAEPDVGISRFASSLPGFR
GALKQRYSDFIVHEVARDGALVRLTSFDLPDEDVDAEEEADPDPDLPHSLESFRLLCGDA
DADTLREFLSRVSEDDSTVSPIILSPDADKAHRSEVHDFFKRNFKFLATDTVEHSDGVQR
CIRVRLKSGPRGRRNFREKARNRTGMRSSRHSGWRDDRPFDSRVSVIWPYHLGKYLRFHL
YKENKDTQEALRVIGKMLGLQPRAFGFAGTKDKRAITTQQVTLFRVHASRLAALNSKLIC
IKVGDFNYVKEGLVLGQLMGNRFTIILRSVVAESEDVIKAAVDGLINSGFINYYGLQRFG
SASVPNHLVGAALLRGEWRNAVSLILDPREGECDDMNGVREHYKEHGDIDSAIRNFPRRL
VAERAILQRLKKYPGNYLQALMAIPRPLRLMYVHSYQSYLWNHAASMRVGKYGFSGVIEG
DLVYRKECPFGEGSVTGASNDDNTNTSEMDISTETLLEETIQSVKIADSEDLLKAVYTLE
DVVLPLPGSETLFPRNEVSGIYHEIANKDGISLTESIHGVEEFSITSIKGGYRRVMQRPV
DCDWDLMTYTDDKIQLVETDLDVLSKAKPSEANKLLSTGTSYEDSLKTSGATILAETKSI
GCSDLLPELAVKLTFTLPASSYATMAIRELTKTSTSVDYQKALNS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgccgccacttcctaaaccccatcctctcccctctctccttcgcaaaaccccct
tcccgtcccctggcctgccgcgccggcgccgtagcccagccgccggggcagcgccgcgcc
gccctcgccgagcccgatgtcggcatctcccgcttcgcctcctcgctccccggcttccgc
ggcgcgctcaagcagcgctactccgacttcatcgtccacgaggtcgcccgcgacggcgcc
ctcgtccgcctcacctccttcgacctccccgacgaggatgtggatgcagaggaggaggcg
gaccccgacccggacctcccgcattcgctggagtccttccggctgctctgcggcgatgct
gatgctgacacgctgagggaatttctgtcgagggtttcagaggacgatagcactgtctcg
ccaatcattctctctcctgacgccgataaggctcatcgctcggaggtgcatgactttttc
aagaggaacttcaaattcttggccacggataccgttgaacacagcgatggggttcagagg
tgtattagggtgcgattgaagtcagggccacgtggacggaggaattttcgcgagaaggcg
aggaataggacgggcatgcgaagttcccggcattcgggctggagagatgataggccgttt
gatagtagggtctctgtaatctggccttatcatcttgggaagtacctcaggtttcatctc
tacaaggagaacaaggacacccaggaggcactaagagtgataggaaaaatgttggggctt
cagccacgggcatttgggtttgcagggacaaaggataaacgtgctattacaacccaacag
gtaacacttttcagggtacatgccagtaggttggctgctctaaatagtaaactcatttgc
attaaagttggagactttaattatgtgaaggagggccttgttcttggtcaactcatggga
aaccgatttacgattatcttaaggagtgtggtggcagaatcagaagatgtaattaaggca
gctgttgatggattaataaatagtgggtttattaattactatggtctacagcgttttggt
agtgcttcagtaccaaatcatcttgttggtgctgctttgcttagaggagagtggagaaat
gcagttagcttgatccttgatccaagggaaggagagtgtgatgacatgaatggggtaagg
gaacattataaagagcatggtgatattgactctgcaattcggaatttccctcggcgtctc
gtagcagagagggctattcttcagcgtttgaagaagtaccctggcaactatctacaagca
ctgatggctatacctagaccactgagattgatgtatgtgcatagttaccagagttactta
tggaaccatgctgcgagtatgagagttggaaagtacggtttttcaggagtcattgaaggt
gacttggtttacagaaaagaatgcccttttggagaaggatcggtaacgggtgcttcaaac
gatgataatactaacacatctgaaatggacatatctactgaaacactcctggaagaaaca
atccagtctgtcaagatagctgattctgaagatttattgaaggcggtgtacacgcttgag
gatgttgtccttcctttgcctggttccgaaacattgtttcctcggaatgaagtttctggg
atttaccatgaaatagctaacaaggatggtatcagcttgacagagagcatccacggtgtc
gaggaattctcaattacaagcataaaaggaggttaccgccgtgtaatgcaacgacctgtt
gattgtgactgggacctcatgacttacacggatgacaaaatacaattagtggaaaccgat
ttagatgttctatccaaagccaagccatcggaagcaaacaaactattatctactgggaca
tcatatgaagattcattgaaaacctctggagcaaccatcctagcagagaccaaatctatt
ggctgctcagatctgttaccagagcttgctgtaaaactaacttttactctaccagcatca
tcttatgctacaatggctatcagagagttgacgaagacttcaacttcggttgattatcag
aaagcattgaactcctga
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